Gene Franean1_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2431 
Symbol 
ID5670827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2893571 
End bp2894017 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content73% 
IMG OID641241348 
ProductNUDIX hydrolase 
Protein accessionYP_001506769 
Protein GI158314261 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.960036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.286625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCGC CCGCCCCCGT CGAGATCAGC GCCCGGGTGC TCTTCGTCGC CCAGGACCGC 
GTGCTGCTGG CGAACCGCCG CGGGCAGCCG TGGTTCTACC TGCCGGGCGG CAACGTGGAC
CCGGGAGAGA CCGTCGAGGC GGCCCTGCGC CGGGAGACCC AGGAGCAGGC CGGCCTCGAC
GTGGCCGACC TGGAGTTCAT CGGCTGCGCC GAGAACGTCT ACGTCGAGGG CGGCGTCCGC
CACCAGGAGA TCAACGTCCT GTTCGCCGCC GATCTGCCCT GGGGGGCGCA GATCGGCAGC
CATGAGTTCG ACGTCGACAT CACCTCGGTG TCGATCGGCA ACCTGTCCGG CCTCGACCTG
CGCCCGGCGA GCCTGCGGGA CGTCATCCAC GGCTGGCTGG CCGACCGGGA GCCGAGCTGG
CACGGAGCGG CGCCGGCCGC GAGGTGA
 
Protein sequence
MAPPAPVEIS ARVLFVAQDR VLLANRRGQP WFYLPGGNVD PGETVEAALR RETQEQAGLD 
VADLEFIGCA ENVYVEGGVR HQEINVLFAA DLPWGAQIGS HEFDVDITSV SIGNLSGLDL
RPASLRDVIH GWLADREPSW HGAAPAAR