Gene Franean1_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2399 
Symbol 
ID5670795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2852535 
End bp2853266 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content77% 
IMG OID641241316 
Producthypothetical protein 
Protein accessionYP_001506737 
Protein GI158314229 
COG category[S] Function unknown 
COG ID[COG4923] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.699479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCCT GCCCCGGCGG ATGGGTGGCC GTCGAGCTGA CCGGCGGCGC CTTCACCGGC 
GCGCGTTTCG CCACCGCGCT GCGCGACATC ACCGACCTCA CCAACCCGAC GGACCAGGCC
GGCCCCGCCA CCCCGGCCAA CGCCGCCGAC CCGACGGCTT CGACGGGCCA GGCCTTCGGC
ATGATCGCCG TTGACATGCC GCTGGGGCTA CTCGCCGACG GCTGGCGGGA ATGTGACCGA
GTGGCGCGGG CCGCGGCCGG GCCGCGCCGG GCGAGTGTCT TCCTCGTGCC TCCGCGGCCG
GTCTGGGCCG TCGAGGAGTT CACGGACGCG AACGCGCTGT GCCGGGCGAT GACCGGCGGC
GGCCTGACCC GCCAGGCATG GGGACTGCGC CCGAAGGTCC TCGAGGCCGA CGCGCTGCGG
GCCGAGCGCC CCGGCGCGCT CCACGAGGTG CACCCCGAGC TGGCGTTCGG CGCGATGGCC
GGCGCGCCGC TGCCCTTCGC GAAGACGACC TGGGCGGGAG CGGCCCGCCG GCGGACCCTG
CTCGCCGGCG CCGGCATCGC GCTGCCCGAC GACCTCGGCG CGGCGAACAC GGTGCCGCCG
GTGGACGTCC TCGACGCCGC GGCGGCGGCC TGGACGGCAC ACCGCATCGC GACCGGCACC
GCCGGCTGCC TTCCGGACCC CGGGCCGGGC CAGCTCGACG ACCGGGGCGT CCCGATCGGG
ATCTGGTTCT GA
 
Protein sequence
MDACPGGWVA VELTGGAFTG ARFATALRDI TDLTNPTDQA GPATPANAAD PTASTGQAFG 
MIAVDMPLGL LADGWRECDR VARAAAGPRR ASVFLVPPRP VWAVEEFTDA NALCRAMTGG
GLTRQAWGLR PKVLEADALR AERPGALHEV HPELAFGAMA GAPLPFAKTT WAGAARRRTL
LAGAGIALPD DLGAANTVPP VDVLDAAAAA WTAHRIATGT AGCLPDPGPG QLDDRGVPIG
IWF