Gene Franean1_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2338 
Symbol 
ID5670736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2785361 
End bp2786152 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content73% 
IMG OID641241257 
ProductAraC family transcriptional regulator 
Protein accessionYP_001506678 
Protein GI158314170 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.317534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.710284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCG ACTCGGGCGG CGGGCCACCG CCAGGCCGTA GAGTTCTGTC GATGAACCGC 
CGTTTCCTGG CCGGGCCCGA GCTGCGGCGG TTGACGGACC GGGAACGGAT CGACTGGCAC
GACCACACCG ACCACCAGCT CATCTATCCG GGCACCGGGG TCCTGCGAGT GGTGACCCGG
GTCGGTTCGT GGGTGGTGCC GCCGCTGCGG GCTGTGTGGC TGCCGGCCGG TGTGGCGCAC
GCGCACCAGG CGCACGGCCC CACACACATG CACTCACTGG CCTTCTCGGA CGTGGACGAC
CCGTTCGGTT CCCCCGACCC GACCGTGGTC GCAGTACCCG CCCTGCTGCG TGAGATCATC
CGGGCGCTCA CCGCGACGGG CCTGGCCGGC GCCGACCGCC GCGACCTGAC CGCCGTCCTG
CTGCGCTCGC TGCGGCCGGT GACCGAGCTG CGGCTTTGCC TGCCCCAGCC GCGCGACGAC
CGCCTCGTCG CTCTCACGGC GGCGCTGGCC GCTGACCCCG CCGATCCGCG GACCCTGGCC
GAGCTCGGCG CCGCCGTAGG GGCGAGCGAA CGTACCCTGA GCCGCCTGTT CCGCCGTCAG
ACCGGGATGA CCTTCCCGCA GTGGCGGGCC CAGCTCCGGC TGCACCATGG CCTTACCCTG
CTCGCCGGGG GTGAGCCGGT CACCACCGTC GCGTTTGCCT GTGGCTACAG CAACCCGAGC
GCCTTCACCG CCGCGTTCCG GGATGCCTTC GGCGTCACGC CCGCCCGCTA CGCCCGCGAG
ACGCGGCAGT GA
 
Protein sequence
MGVDSGGGPP PGRRVLSMNR RFLAGPELRR LTDRERIDWH DHTDHQLIYP GTGVLRVVTR 
VGSWVVPPLR AVWLPAGVAH AHQAHGPTHM HSLAFSDVDD PFGSPDPTVV AVPALLREII
RALTATGLAG ADRRDLTAVL LRSLRPVTEL RLCLPQPRDD RLVALTAALA ADPADPRTLA
ELGAAVGASE RTLSRLFRRQ TGMTFPQWRA QLRLHHGLTL LAGGEPVTTV AFACGYSNPS
AFTAAFRDAF GVTPARYARE TRQ