Gene Franean1_2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2314 
Symbol 
ID5670712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2764005 
End bp2765090 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content70% 
IMG OID641241233 
Productluciferase family protein 
Protein accessionYP_001506654 
Protein GI158314146 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.857233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTTC TGGCGATCAC CTTGATCGTC CACGCGCCCG ACCCGCTGAC CGGGGTGCGC 
CGGTCGACCA CGGCCTGGCT CCACGAGGTG GTCGACAACG CGGTGCTGGC CGAGGAGCTG
GGGTTTGACG GCTTCGGGGT GGGTGAGCGG CACGAGCGGC CGTTCATCTC CTCGTCGCCG
CCGGTGGTGC TCAGCCACAT CGCGGCCCGC ACGGCCAGGA TCAGGCTGTT CACCGCCGTC
ACGACGCTGA GCCTTCTCGA CCCGGTGCGG GCCTACGAGG ACTACGCCAC CCTCGACCAG
CTGTCCGGGG GGCGGCTGGA GCTGATGGTC GGCAAGGGCA ACGGCGCCGC GCAGGCAGAG
CTGTTCCACG TCACCGCGGC GGACCAGTGG GACCGCAACC GCGAGTCCTA CGAACTGTTC
CGCCGGCTGT GGCGGGAGGA CAAGGTCACC TGGTCCGGCC GGTTCCGCCC GCCACTGGAG
GAGGCCGAGA CCTGGCCGCG CCCGCTGCAG CCGGAGATCC GGATCTGGCA CGGCAGCGCG
ACCAGCGAGG CGTCGGTGGA CCTCGCGGCC CGGTACGGCG ACCCGTTGTT CTCCGCGAAC
GTGACCAATC CGGTCGAGCC GTACGCGGAG CTGGTCCGCT ACTACCGGGA GCGCTGGGTG
GCCTACGGGC GCGACCCGGC CGACATCCTC GTGGGCGCCG GAACCGCCGG TTACTACAGT
GCTCGCTGCT CCCAGGACGC CGTCGCGCGC TACCGGCCGA TCTTCGACGC CCGGACGGCG
ATGTTCCGGA AGATGGGCCT GGAGCCGGTC TTCCCGACCC TTGAGGACGC GATCGAACGC
AGCTCGATCC TCGTGGGCAG CCCGCAGCAG ATCATCGAGA AGGTCCACTG GTACCACGAG
CGGCTCGGCC ATGAGGTGAT GCACCTGCAC GCCGACGCGG ACGGCCTCAG CCCGAAGGAG
CACCGCGAGA CGATGGAGCT CTTCCAGAGC GACATCGCCC CGGTGCTACG CAGGGAGATC
CCGAGCCGTC CCTTCCCCAC CCCGCCGCCG CTTCCCTCCG ACGTCCTCCC CGACGCCCCG
GAGTGA
 
Protein sequence
MRFLAITLIV HAPDPLTGVR RSTTAWLHEV VDNAVLAEEL GFDGFGVGER HERPFISSSP 
PVVLSHIAAR TARIRLFTAV TTLSLLDPVR AYEDYATLDQ LSGGRLELMV GKGNGAAQAE
LFHVTAADQW DRNRESYELF RRLWREDKVT WSGRFRPPLE EAETWPRPLQ PEIRIWHGSA
TSEASVDLAA RYGDPLFSAN VTNPVEPYAE LVRYYRERWV AYGRDPADIL VGAGTAGYYS
ARCSQDAVAR YRPIFDARTA MFRKMGLEPV FPTLEDAIER SSILVGSPQQ IIEKVHWYHE
RLGHEVMHLH ADADGLSPKE HRETMELFQS DIAPVLRREI PSRPFPTPPP LPSDVLPDAP
E