Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2300 |
Symbol | |
ID | 5670699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2750156 |
End bp | 2750932 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641241220 |
Product | hypothetical protein |
Protein accession | YP_001506641 |
Protein GI | 158314133 |
COG category | [S] Function unknown |
COG ID | [COG3595] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0527677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGC CGGGCCGGCG GGCCGCGCTC GCCGTCGGCG CGCTGCTCGC CGTCGTGGGC ACCGCGGTCT GCGGCGTGCA GACCGTCGAC GAGACGTCCG GCGAGGTGCG GCGGGTGGAG CACCGGGTGT TCTCCGGTGA CGTCCAGATG GTCCGGGTCC ACACCAACTC CGGCCGCATC CAGATCGCGG GCGCTGCCGG GCGCGTCGTC GACGTCGAGG GCAGTCTCGC CGGGACGGTC TCCGTCCCGG CGATGTCGGC CGAGGTCCGT GACGGCGTCC TCACTCTTGA CGCCGACTGC GGCGGGGGGT TCTGGGACTG CGAGGCGTCG TTCGCGGTCC GCGTGCCGGC GGGCATCCGG GTGGTCGCCG AAACGGGCTC CGGCGAGGTC GAGGCGACCG ACCTGCTCTC CGCGGCGACA CTGCGCAGCG GATCCGGGAC TGTCCGGGTG GACGGTGCCC GTGCCCAGCT GACGATGTCG ACGGCCTCGG GGAACCTGCG CGCGGTCGGC GTCACCGCCA CCGAGGTCGA CGCGTCCACG GCGTCGGGGA ACGTGCGCAT CGAGCTGGCC ACCGCCCCCG AGGACGTCTC CGCGCACTCG GCGTCGGGCA ACGTGCGGAT CACCGTGCCG GACGACGGTG AGGTGTACGC GACCGAGGTC CACACCGGGT CGGGTAACAC CCTGGTCGGT GTGCGAACGG ACCCGTTGGC GACGCGCCGC CTGCGCGCGT CCACCAGCTC GGGGAACGCG GAGATCGACT ACGCCGACCC GACCTGA
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Protein sequence | MSEPGRRAAL AVGALLAVVG TAVCGVQTVD ETSGEVRRVE HRVFSGDVQM VRVHTNSGRI QIAGAAGRVV DVEGSLAGTV SVPAMSAEVR DGVLTLDADC GGGFWDCEAS FAVRVPAGIR VVAETGSGEV EATDLLSAAT LRSGSGTVRV DGARAQLTMS TASGNLRAVG VTATEVDAST ASGNVRIELA TAPEDVSAHS ASGNVRITVP DDGEVYATEV HTGSGNTLVG VRTDPLATRR LRASTSSGNA EIDYADPT
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