Gene Franean1_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2300 
Symbol 
ID5670699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2750156 
End bp2750932 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content74% 
IMG OID641241220 
Producthypothetical protein 
Protein accessionYP_001506641 
Protein GI158314133 
COG category[S] Function unknown 
COG ID[COG3595] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0527677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGC CGGGCCGGCG GGCCGCGCTC GCCGTCGGCG CGCTGCTCGC CGTCGTGGGC 
ACCGCGGTCT GCGGCGTGCA GACCGTCGAC GAGACGTCCG GCGAGGTGCG GCGGGTGGAG
CACCGGGTGT TCTCCGGTGA CGTCCAGATG GTCCGGGTCC ACACCAACTC CGGCCGCATC
CAGATCGCGG GCGCTGCCGG GCGCGTCGTC GACGTCGAGG GCAGTCTCGC CGGGACGGTC
TCCGTCCCGG CGATGTCGGC CGAGGTCCGT GACGGCGTCC TCACTCTTGA CGCCGACTGC
GGCGGGGGGT TCTGGGACTG CGAGGCGTCG TTCGCGGTCC GCGTGCCGGC GGGCATCCGG
GTGGTCGCCG AAACGGGCTC CGGCGAGGTC GAGGCGACCG ACCTGCTCTC CGCGGCGACA
CTGCGCAGCG GATCCGGGAC TGTCCGGGTG GACGGTGCCC GTGCCCAGCT GACGATGTCG
ACGGCCTCGG GGAACCTGCG CGCGGTCGGC GTCACCGCCA CCGAGGTCGA CGCGTCCACG
GCGTCGGGGA ACGTGCGCAT CGAGCTGGCC ACCGCCCCCG AGGACGTCTC CGCGCACTCG
GCGTCGGGCA ACGTGCGGAT CACCGTGCCG GACGACGGTG AGGTGTACGC GACCGAGGTC
CACACCGGGT CGGGTAACAC CCTGGTCGGT GTGCGAACGG ACCCGTTGGC GACGCGCCGC
CTGCGCGCGT CCACCAGCTC GGGGAACGCG GAGATCGACT ACGCCGACCC GACCTGA
 
Protein sequence
MSEPGRRAAL AVGALLAVVG TAVCGVQTVD ETSGEVRRVE HRVFSGDVQM VRVHTNSGRI 
QIAGAAGRVV DVEGSLAGTV SVPAMSAEVR DGVLTLDADC GGGFWDCEAS FAVRVPAGIR
VVAETGSGEV EATDLLSAAT LRSGSGTVRV DGARAQLTMS TASGNLRAVG VTATEVDAST
ASGNVRIELA TAPEDVSAHS ASGNVRITVP DDGEVYATEV HTGSGNTLVG VRTDPLATRR
LRASTSSGNA EIDYADPT