Gene Franean1_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2273 
Symbol 
ID5670672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2715280 
End bp2716227 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content75% 
IMG OID641241193 
Productmolybdate ABC transporter, inner membrane subunit 
Protein accessionYP_001506614 
Protein GI158314106 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4149] ABC-type molybdate transport system, permease component 
TIGRFAM ID[TIGR01581] NifC-like ABC-type porter
[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.490421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0715353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGG GCCGTCCGGC ACGGCAGGCG GCCGGTTCGA CACCACCCGT GCCCGCCGCG 
GTGACCGGTG GTGTCGAACC GGAGCTCCCC CGACGCGGCG ACGGTGCCGG CCGGGGCCGG
CGGGGCGGCC GGGGCGCGCG GCGCGAGGTG CGCGTCCGCG CTCCCTGGCC GCTCGCCGTG
CCGGCGGCGC TCGCCACCGT GTTCCTCCTG CTGCCACTCG TCGCACTGAT CATCAGGGCT
CCCTGGGAGT CGCTGCCCGA TCTGCTGAGC GATCCCTCGA CCAGGCACGC GCTGTGGCTG
TCGGTGCGCA CCGCCACCGT GACGACCGTG ATCTGCGTCC TGTTCGGGGT ACCGCTGGCC
TGGGCGCTGG CGCGGGGCTC CTTCCCGGGG CGGGGCCTGC TGCGCGCGCT GGTCACCATC
CCGCTGGTGC TGCCGCCGGT CGTCGGCGGC GTGGCGCTGC TGCTCGTACT CGGCCGGCGC
GGCCTCGTCG GCAACCGCCT CGACGACTGG TTCGGGCTCA CGATCCCGTT CACGACCAAC
GCCGTGATCA TCGCGCAAAC CTTCGTCGCG CTGCCGTTCC TGGTGCTGTC GGTCGAGGGC
GCCCTGAGCG CCGCCGACCG CCGGTTCGAG GACGCGGCGG CCACCCTCGG CGCCAGCCGG
GCGACGGCCT TCTTCCGGGT GACCCTGCCG ATGGTCGCGC CGGCGGTCGC CGCCGGCGCC
GTGCTGAGCT GGGCGCGGGC CCTGGGCGAG TTCGGCGCGA CGATCACCTT CGCCGGCAAC
TTCCCGAAGA CCACCCAGAC GATGCCCCTC TCCGTCTACC TGGCGATGGA GACCGACCCC
GACGCCGCCG TGGCGCTGTC GCTGGTGCTG CTGGTGGTCA GCATCGTCGT CCTGGTCGCC
CTGCGTGGCC GCTGGTGGGA CGCCCGACGA ACGCAGCGCC TCGCATGA
 
Protein sequence
MTLGRPARQA AGSTPPVPAA VTGGVEPELP RRGDGAGRGR RGGRGARREV RVRAPWPLAV 
PAALATVFLL LPLVALIIRA PWESLPDLLS DPSTRHALWL SVRTATVTTV ICVLFGVPLA
WALARGSFPG RGLLRALVTI PLVLPPVVGG VALLLVLGRR GLVGNRLDDW FGLTIPFTTN
AVIIAQTFVA LPFLVLSVEG ALSAADRRFE DAAATLGASR ATAFFRVTLP MVAPAVAAGA
VLSWARALGE FGATITFAGN FPKTTQTMPL SVYLAMETDP DAAVALSLVL LVVSIVVLVA
LRGRWWDARR TQRLA