Gene Franean1_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2263 
Symbol 
ID5670662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2705909 
End bp2706691 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID641241183 
Producthypothetical protein 
Protein accessionYP_001506604 
Protein GI158314096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0552283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0379281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGTCAC CCAGGGCCTT TACACCGTCG CCGACGCCAT CTTCTATACA AATCTCATCG 
TATTTCACAA TTGCAATATT TCCATCGCTG GCCGATCTGT TCTACATCGG CCGCTACCCG
TTTGCGATCG CGGCGCTGGC ACTGCTGTTC CGGCAGCGGG CACCCGGCCG CAATCTCTCG
GCGGTGCTGG ACACTACGTC CATCGCCGTC GCCATGTCGC TGTTGTACTG GCTCTATGTG
ATCACACCCT ACGAGCGGGC GACCTCAGGG CAGCTCGCCC AGCTGGCCTC GGTCGCCTTT
CCCGTGATGG ACCTCGGCCT GCTCGTCATG TCGCTGATAC TGGTGCTCGC GCCCGGCCGC
CGGCCGGCCT CGTTCGTCCT GCTGGTCGCC AGCCTGGTGG TCACCCTGGC CTCCGACGTC
CTGTGCACCA TCTCGGCGCT GGGCGGCAGG TACGTCGTCG CGGACGTCAC CGAGTCCCTC
TGGGCCCTCG GGGACGTGCT GGTCGCCGCC GCCGCGCTGC ACCCGTCGAT GGCGGACCTG
TCGTGCTCCC CGCAGGTCGA CGACCGACGG CTCGGTCCCG GCAGGCTCGC CGCACTGCTG
GCGGCCGCGC TGGTCACTCC GGTGCTCCTG CCGGCCGAGG CGACCGGTCA CCCACCCAGA
TCAGGATCAT CGCGCTCGCC GATGTCCGCC AGCAGGCGCC GCCGGCTGCG CGCGCCGACC
AGCTTCGTGA CCGTCTCACC GCCCCGGACG ACCACCAGGG TCGGCATGGC CAGCACACCG
TAG
 
Protein sequence
MPSPRAFTPS PTPSSIQISS YFTIAIFPSL ADLFYIGRYP FAIAALALLF RQRAPGRNLS 
AVLDTTSIAV AMSLLYWLYV ITPYERATSG QLAQLASVAF PVMDLGLLVM SLILVLAPGR
RPASFVLLVA SLVVTLASDV LCTISALGGR YVVADVTESL WALGDVLVAA AALHPSMADL
SCSPQVDDRR LGPGRLAALL AAALVTPVLL PAEATGHPPR SGSSRSPMSA SRRRRLRAPT
SFVTVSPPRT TTRVGMASTP