| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2243 |
|---|
| Symbol | |
|---|
| ID | 5670642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2680057 |
|---|
| End bp | 2680962 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641241163 |
|---|
| Product | urate oxidase |
|---|
| Protein accession | YP_001506584 |
|---|
| Protein GI | 158314076 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3648] Uricase (urate oxidase) |
|---|
| TIGRFAM ID | [TIGR03383] urate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0348041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00681742 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCG TTCTCGGACC GAACCAGTAC GGCAAGGCCG AGGTACGGCT CGTCCACGTG
GACCGGTCCA CACCGGCGCA CCGGATCACC GACCTGACGG TCTCCACCGC GCTGCGCGGC
GACTTCACCG CCGCCCACAC CCGCGGCGAC AACAGCCACG TTCTCACCAC CGACACCCAG
AAGAACGTCG TGTACGCCTT CGCCCGGGAA GGCGGCGTAG GCGAGATCGA ACAGTTCGCG
AGCCGGCTGG GACGGCATTT CACGACCACC GCCGACTGGA TCACCGGGGC GCGGATCGAG
ATCGAGCAGC ACGAGTGGGA ACGGATCACG GTCGACGGGC GGGAACACGA CCACTCCTTC
GTCCGGTCGG GACGCGGAAC GCGAACGACC GTGGTCACGG TGGAGGCGGA CGCCGTCCAC
GCCGTGTCCG GACTCGCCGG GCTGGTCGTT CTCAGGTCAA CCGGCTCGGA GTTCCACGGA
TTCCCGCGCG ACCGGTACAC CACCCTGGCC GAGACGTCCG ATCGAATCCT CGCCACCGAG
GTCACAGCGC GGTGGCGTTA CCTGGACGCG GACGGCATGT CCGGCGCCGA CTTCGCGCGT
CTCGCCGCCG GGATACCGCG CGCGCTCGTC GAGACCTTCG CGGCCGAGCA CAGCCTCGCG
CTGCAGCAGA CCCTGCACCA GATGGGTGAG GCCGTCCTCA CCGCTTTTCC GGAAGTCGCC
GAGATTCGCA TGTCGATGCC GAACAAGCAC CATTTCCTGG TCGACCTGGA ACCGTTCGGC
CTGGACAACC CGAACACCGT CTACCTGGCC GCGGACCGTC CCTACGGGCG GATCGAGGGC
ACGGTGCGGC GCGACGACGT CCCGGAGGCC CCCGCCGCCT GGTACGGCAC GCCCGGCTTC
TGCTGA
|
|---|
| Protein sequence | MAIVLGPNQY GKAEVRLVHV DRSTPAHRIT DLTVSTALRG DFTAAHTRGD NSHVLTTDTQ
KNVVYAFARE GGVGEIEQFA SRLGRHFTTT ADWITGARIE IEQHEWERIT VDGREHDHSF
VRSGRGTRTT VVTVEADAVH AVSGLAGLVV LRSTGSEFHG FPRDRYTTLA ETSDRILATE
VTARWRYLDA DGMSGADFAR LAAGIPRALV ETFAAEHSLA LQQTLHQMGE AVLTAFPEVA
EIRMSMPNKH HFLVDLEPFG LDNPNTVYLA ADRPYGRIEG TVRRDDVPEA PAAWYGTPGF
C
|
|---|
| |