| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2216 |
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| Symbol | |
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| ID | 5670615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2652419 |
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| End bp | 2653054 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641241136 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001506557 |
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| Protein GI | 158314049 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00683516 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0356101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGGC TCATCTCGGT CGCCGCTGTC GACGACCACC CCATCGTGCT CCGCGGCCTC
GCCGACGTCA TCGAAGGGCT CGACGGCCTC ACCCTTCTGG CCACGGCGAC GTCGATCGCC
GAGCTGCTGG CCGGCCCGGG CCGGAAGGCG GACGTCGTCC TGCTCGACCT CGACCTCGGC
GACGGCTCGG AGGCACCCGA CAACATCCGG AAACTCACCG GCATCGGCGC CTCGGTGATC
GTCTTCAGCG CGCTCGGCGA CCCTAAGGCC GTCCGCGGCG CGATGCGCGC GGGCGCCGTT
GGCTTCGTCA CCAAGACCGA CGACGTTGGC GAGCTGGCCA CCGCGATCCG CGCGGCCGGG
GCGGGGACCG GCTGGGTCTC ACCCCAGCTG GCGTTCATGC TCCTGACCGA CGAGGCGCCC
GACCGGCCGA CGCTGTCACT CAAGGAGCTG GAGGCCCTGC GCCTCTACGC GACCGGTATG
CCACTCAAGA CCGTCGCCCG CAAGATGACC GTCTCCCCGG AGACCGCGAA GCAGTACATC
GAGCGGGTGC GGGTGAAGTA CCGCAAAGCC GGCCGCCACG CCGACACCAA GATCGATCTC
TACAAGCGCG CGAAGGAGGA CGGCCACCTC GACTGA
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| Protein sequence | MSRLISVAAV DDHPIVLRGL ADVIEGLDGL TLLATATSIA ELLAGPGRKA DVVLLDLDLG
DGSEAPDNIR KLTGIGASVI VFSALGDPKA VRGAMRAGAV GFVTKTDDVG ELATAIRAAG
AGTGWVSPQL AFMLLTDEAP DRPTLSLKEL EALRLYATGM PLKTVARKMT VSPETAKQYI
ERVRVKYRKA GRHADTKIDL YKRAKEDGHL D
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