Gene Franean1_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2146 
Symbol 
ID5670546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2576306 
End bp2576710 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content61% 
IMG OID641241067 
Productreverse transcriptase 
Protein accessionYP_001506488 
Protein GI158313980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTACT GCGTGACTCT CGAAGAGGCG GTGCGGGTGC GCGATGCGGT CGCTGCGCGG 
CTGGCGGAAT TCGGGATGGA GCTACACCCG GACAAGACCC GCATCGTGTA CTGCAAGGAC
GTCGACCGGC GTGGCAACCA TGAGGTCACG TCGTTCACGT TCCTTGGGTA CACGTTTCGG
CCACGGCTGT CCCGTAATCG GTGGGGGAAG CACTTCGTGA ACTTCACCCC CGTGGTCAGC
AGGGAAGCGG TCAGGCGGAT GAGTCGGGAG ATACATTCTT GGCACATTCC GCGGCGCAGC
GACAAGTCGC TTCAGGACCT GGCGCGCGCG TTCAACCGCA TCGTGCAGGG TTGGATCAAC
TACTTTGGAC GCTTCTACAA GTCCATGTTG TATCCGCTCT TTTAG
 
Protein sequence
MAYCVTLEEA VRVRDAVAAR LAEFGMELHP DKTRIVYCKD VDRRGNHEVT SFTFLGYTFR 
PRLSRNRWGK HFVNFTPVVS REAVRRMSRE IHSWHIPRRS DKSLQDLARA FNRIVQGWIN
YFGRFYKSML YPLF