| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2012 |
|---|
| Symbol | |
|---|
| ID | 5670413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2418353 |
|---|
| End bp | 2419309 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641240933 |
|---|
| Product | amidinotransferase |
|---|
| Protein accession | YP_001506355 |
|---|
| Protein GI | 158313847 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1834] N-Dimethylarginine dimethylaminohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.262975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGA CGAAGTCCTG CCAGACCGAC GATCCGTGTC CGTCCGATGT TCCCGTGATT
CCGCGGTTGT CTCGTCCGCG GAGCCTGCGG CGGCGGGCTG GCATCCTGGT GTGCGTGGAC
GCTGCCCCGG GAGATTCGAC TGTCTCGCGT CGAGCCTCTG CCCGCAGGTA CCTCATGTGT
CCACCGGAGT ACTTCGACGT CACCTATGCC ATCAACCCGT GGATGCGCCC CGAGGTACCG
ACGGACCTCG CCCGGGTACA CGCCCAGTGG GAGGCGCTGC GGGCCGTGTA TCTGGGGCTG
GGCCACCAGG TCGAGTTGGT CGAGCCGGTT CCCGGGCTAC CTGACATGGT CTACGCGGCC
AACGGCGGCC TGGTCGTCGA CGGCGTCGCG GTCGGGGCGC GTTTCCGGTA CCCGCAGCGG
CGGGCCGAGG CTGACCACTA CCTCGACTGG TTCCGCGGGG CTGGAATGCG GCGGGTGCAC
GCCCCGTCGT ACGTCAACGA GGGCGAAGGA GATTTCCTGC CGGTCGGCGG CGTTGTCCTG
GCCGGGACGG GTTTCCGTAC CGAGCCACGT GCGCACGCCG AGGTGGCGGG CGTTCTCGGC
CGCAGGGTGC TGACCCTGGA GCTGGTCGAT CCGCGTTTCT ACCATCTCGA CACCGCGCTC
TGTGTCCTCA CCGAGGACCT TGTCGCGTAC TACCCGGCGG CATTCAGCGC GCGGAGCAAC
GCCCTGCTCC GGGAGACATT TCCGGGGGCT CTCACGGTGT CCGAGCGGGA GGGGGTCGCG
TTCGCGCTGA ACGCGGTCAG TGATGGGCTG CACGTGGTGA TCTCGGCCGA TGCTGTCGGG
TTCGCGAGCA CTCTGCGTGA CCATGGATTC ATCCCGGTCG GCGTGGCCAC GGATGAGATC
CGGCGGGGTG GCGGCGGCGC GAAATGCTGC ACGCTGGAAC TGCGTCCGGC CGGCTGA
|
|---|
| Protein sequence | MARTKSCQTD DPCPSDVPVI PRLSRPRSLR RRAGILVCVD AAPGDSTVSR RASARRYLMC
PPEYFDVTYA INPWMRPEVP TDLARVHAQW EALRAVYLGL GHQVELVEPV PGLPDMVYAA
NGGLVVDGVA VGARFRYPQR RAEADHYLDW FRGAGMRRVH APSYVNEGEG DFLPVGGVVL
AGTGFRTEPR AHAEVAGVLG RRVLTLELVD PRFYHLDTAL CVLTEDLVAY YPAAFSARSN
ALLRETFPGA LTVSEREGVA FALNAVSDGL HVVISADAVG FASTLRDHGF IPVGVATDEI
RRGGGGAKCC TLELRPAG
|
|---|
| |