Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2009 |
Symbol | |
ID | 5670410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2415212 |
End bp | 2415958 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641240930 |
Product | hypothetical protein |
Protein accession | YP_001506352 |
Protein GI | 158313844 |
COG category | [S] Function unknown |
COG ID | [COG2343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.147252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTCTCA CGACCGGACG AGGCCCCCTG TCCACGCGGC CGGCCGGCCG CTTCAGCGCG TCTCTCCCGA CACCGCTCGT CTACGTCGAG CCCTTCCAAC GTCGGGTACG CGGCCGTTCC GACGGTCGGA CCGTGGTCGA CAGCGAGCGA GTGCTGCTGG TTCATGCACC GGGACAACCT CCGACCTATG CGTTCCCCTC CGAGGATGTC CAGGCGACTG TGGCATCCGA ACCCGAGCCC GCCGTCGCAG GACACGTACG GGTTCCATGG GACGCTGTCG ACGAATGGTG GGAAGAAGAG GAACGGATGC TCGGGCATCC GCGCAACCCC TACCACCGGG TCGACTGCCT TCGCTCGACT CGGCGCCTGC GCGTCGAGGT CGGCGACGCG GTCCTCGTTG ACACCTCGGA CACCGTTGCC CTGTACGAGT CCGCGCTCGC ACCACGGCTG TACGTTCGCC GCCAGCAGGT CGACATGGGA CTTCTCCGCC CGAGCACGAC GACGACCTAC TGCCCCTACA AGGGAGCCGC GTCCTACTGG TCGGCGATCG TCGGGGACGT CGTCGTGGAG GACGTCGCCT GGTCGTACGA GGATCCGCTC CCCGAGAGTA TCCCGATCTC CGGCCTGCTG AGCTTCGACG GATCGCGTGT GACGGTGAGG CACGATCTGC CCGCCCCGAC CCGCGCCCTC GAGGACCTCG AGCCGCAGCC GGACGGACCG ACCTGCAGTA ACGGCGGACG GTGCTGA
|
Protein sequence | MSLTTGRGPL STRPAGRFSA SLPTPLVYVE PFQRRVRGRS DGRTVVDSER VLLVHAPGQP PTYAFPSEDV QATVASEPEP AVAGHVRVPW DAVDEWWEEE ERMLGHPRNP YHRVDCLRST RRLRVEVGDA VLVDTSDTVA LYESALAPRL YVRRQQVDMG LLRPSTTTTY CPYKGAASYW SAIVGDVVVE DVAWSYEDPL PESIPISGLL SFDGSRVTVR HDLPAPTRAL EDLEPQPDGP TCSNGGRC
|
| |