Gene Franean1_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2007 
Symbol 
ID5670408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2412929 
End bp2413975 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content71% 
IMG OID641240928 
Producthypothetical protein 
Protein accessionYP_001506350 
Protein GI158313842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0837693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGA GTTGGGAACT TGTGCCCCCA CCGCCTGCGG AGCCGCCGCT GCACCCGCGG 
CGCGGCATAC ACGAGCCGAC CGCAGGCAGC CCCCCGCGCC GTCCCGGTTC GGTGCGGCGA
ACGATCACAC TCGACTCGCT GCGCCCGGAC GGCCCGACCG GAAACCTGAT CCTGATCGGC
CGCGGTCGGG ACCTGGCCAC CGGCCCCGAG GGCGCCGCCT CCGTGATCGC CGAGGCGATG
TTCCGCTTCG AGATCGCCTT CCAGAGCCGT CGCGAAATCC TGCGCGTCGA GACTGCTCCA
GAGGTCCCCG AACTGGCCGG CCTCATCGGC GTGAGCTCCA CATCCGGCTT CCGTCGTCAC
CTGGCCGAGA TCGTGCCGGA GCTCCGGGCC ACCCATCCTC TGCTTGCCGC GTTGTTCGAC
GACGCCCCGG TGACCTCGCT CGTCTCCGGC TACGCGACAA CTCGCATGGG CCTCGTTCAC
GGCGATGGAC GGATCATGCT GGCGCAGGCC GACCAATGCG CAGGCTGGGC GCGCGGTGCG
ACGATCATCA ACTCGATCGA GGACGGGAGC GGCCCACCCA TGGTCACCGG CCCACGGGCG
CCGTCCCTGC TGGTGCCCGA TGATCCGATG GCATGGCATG CGCTGACCGG ACTGCCTCCG
CACGGCATGC GGCGGGCCCG CCGCCTTGAC CTGCTGCCCG CCGGCGTCGA CGCACTGCAG
GTGGACGTGC TTTTCCGGGA CAGCTACCAG TCCGACAGCG GACCTGAGGC CGTCATCCAC
GAGTACACGG TGAACGCGCT GCTCGACCCG GAGACAATGA CGTTCACCGA GATCGTGTCG
ACTCCGCGCG CGCTGCCGTG GGTCGAGTGC CCGAGCGCGG CCGCGAGCGC CGCCCGGCTG
GCTGGCGCCG CAGCCGCAGA CGCCCGGCAG GCCGTGGGTA CAACCTTCCG CGGTACGTCC
ACCTGCACGC ACCTGAACGA CACACTGCGA TCGCTCGGCG ATGTCCCCGC TCTGGCGGCC
ATGCTGCCAG GGCGCTCGGC ACCGTAG
 
Protein sequence
MASSWELVPP PPAEPPLHPR RGIHEPTAGS PPRRPGSVRR TITLDSLRPD GPTGNLILIG 
RGRDLATGPE GAASVIAEAM FRFEIAFQSR REILRVETAP EVPELAGLIG VSSTSGFRRH
LAEIVPELRA THPLLAALFD DAPVTSLVSG YATTRMGLVH GDGRIMLAQA DQCAGWARGA
TIINSIEDGS GPPMVTGPRA PSLLVPDDPM AWHALTGLPP HGMRRARRLD LLPAGVDALQ
VDVLFRDSYQ SDSGPEAVIH EYTVNALLDP ETMTFTEIVS TPRALPWVEC PSAAASAARL
AGAAAADARQ AVGTTFRGTS TCTHLNDTLR SLGDVPALAA MLPGRSAP