| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1851 |
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| Symbol | |
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| ID | 5670253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2222811 |
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| End bp | 2223965 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641240772 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001506195 |
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| Protein GI | 158313687 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0177268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAACG ACGCGATCCG GGCCCGCGAC GAGGCGTACA AGGCCGGCGA GAAACTGTCG
GACACCGAGG TTCAGCGCCG GGTGGTCACC CTCGCGAAAC TCACCGACGA GCGAACCTGG
CTGTCCGAGG TGTCGTCGGT GGTACTCGTG CAGGCGTGCC AGGACGCACG CCGGGCGTTC
CGGAACTGGT TCGACTCGCT GTCCGGGAAG CGGAAAGGCC GGCAGGTCGG CCATCCGCGG
TTCCGGTCAC GGAAGGACAA CCGGCAGTCG ATCCGCCTCA CCCGCAACGG CTTCACCGTC
ACGCCCCGAG GGGTGCGGGT GGCGAAGGTC GGAGATCTGC GGCTGGCCTG GTCGCGTCCG
CTGCCCTCGG TTCCGACGTC GGCGACGGTG ATCCGGGAGG CGGACGGCAG GTACTACGTG
TCGTTCGTCG TCGACGTCGA CGACGTCCCC TCCCCGGCGA CAGGCGCCGA GATCGGCGTC
GACCTCGGGT TGGACCGGCT CGCGACCCTG TCAACCGGAC AGATCGTCGC GAACCCGCGT
CCTCTGCGGT CGCGTCAGCG CAGGCTCGCC CGCGCACAGC GGGCACTGGC CCGCAAGCGG
AAGGGTTCGG TGAACCGGCG CAAGGCGGTC CGCCGGGTCG CGGTCGAACA TCGGAAGGTA
CGGGACACCC GCCGGGATCA TCATCACAAG CTCGCTGCTC GGCTGGTCCG CGACAACCAA
GCGGTCTACG TCGAGGATCT GGCGGTAGCC GGGCTGGCTC GTACGCGGCT GGCCCGGTCG
GTGCACGACG CGGGCTGGTC GATGCTGGTC GGTCTGCTCG AGGAGAAAGC GGCCCGGTGT
GGCCGGGCCG TGGTGAGGGT GGGCCGGTTC TTCCCGTCGT CGCAGGTCTG CTCGGCCTGC
GGCCACCGGG ACGGCCCGAA GCCTCTCCAG GTCCGGACGT GGACCTGTCC GGGGTGCGGT
GTCAGCCACG ACCGGGACCT GAATGCCGCG CGGAACATCC TCGTCGAGGG TCAGCGCCTG
GTCGCCGCCG GGCGGAAAGG CGTGGCTGCA ATGCCACGTC AGGCGGAGAC CGTAAACGCC
TGCGGAGCCG ACGTGAGACC CGGACCCCTC CGGGCAGCTG GCTGTGAAAC AGGAACCCAC
CGAGGTGCCG CGTGA
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| Protein sequence | MFNDAIRARD EAYKAGEKLS DTEVQRRVVT LAKLTDERTW LSEVSSVVLV QACQDARRAF
RNWFDSLSGK RKGRQVGHPR FRSRKDNRQS IRLTRNGFTV TPRGVRVAKV GDLRLAWSRP
LPSVPTSATV IREADGRYYV SFVVDVDDVP SPATGAEIGV DLGLDRLATL STGQIVANPR
PLRSRQRRLA RAQRALARKR KGSVNRRKAV RRVAVEHRKV RDTRRDHHHK LAARLVRDNQ
AVYVEDLAVA GLARTRLARS VHDAGWSMLV GLLEEKAARC GRAVVRVGRF FPSSQVCSAC
GHRDGPKPLQ VRTWTCPGCG VSHDRDLNAA RNILVEGQRL VAAGRKGVAA MPRQAETVNA
CGADVRPGPL RAAGCETGTH RGAA
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