Gene Franean1_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1822 
Symbol 
ID5670224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2187354 
End bp2187800 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content66% 
IMG OID641240743 
Productcyclase/dehydrase 
Protein accessionYP_001506166 
Protein GI158313658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.292754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACC ACGCGCAGTC GTCGATCGTC ATCGATGCCA GGCCGGCCGT CATCATGGGG 
GCCATCGCGG ACATCGCCGC CTACCCGACC TGGGTCGGCC AGATCGAACA GGCCGAGATC
CTCGAGGTCG GCCCGGACGG CCGCCCGCGG CAGGCCCGGT TCCGGATCAA CGCCGTCGTC
GTGAAGGACG AGTTCGTCAA CGAGTACACC TGGAAGGGCG ACGAGCACGT CAGCTGGAGC
CTCGTCTCCG GCGAGGCGAT GTCGACCCAG GACGGTTCGT ACACGTTGCG TGATCTCGGC
GACGGCAGCA CCGAGGTGAC CTACGACCTC ACCGTCGAGC TCAAGATCAA GATCCCCGGC
CTGCTCCGTC GGAAGGTGCA GGGCGGCATC GTCGACGCGG CGCTCAAGGA CCTCAAGAAG
CACGTCGAGA AGCTCACCGA GAGCTGA
 
Protein sequence
MADHAQSSIV IDARPAVIMG AIADIAAYPT WVGQIEQAEI LEVGPDGRPR QARFRINAVV 
VKDEFVNEYT WKGDEHVSWS LVSGEAMSTQ DGSYTLRDLG DGSTEVTYDL TVELKIKIPG
LLRRKVQGGI VDAALKDLKK HVEKLTES