Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1815 |
Symbol | |
ID | 5670217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2178766 |
End bp | 2179176 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641240736 |
Product | histidine triad (HIT) protein |
Protein accession | YP_001506159 |
Protein GI | 158313651 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0400003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0526222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTG TCTTCACCCG GATCATCAAC GGCGAGCTCC CGGGCCGCAT CGTCTACTCG GACGAGTCGG CGGTCGCGTT CCTCTCCATC GCGCCCGTCC GCCCCGGGCA CACGCTCATC GTGCCCCGCC TGGAGATCGA TCACTGGATC GATCTGCCGG ACGAGACGGT GCGCGCGGTG TGGAGTGCCG CGGCTGTCGT CGGGCGGGCC ATAGACACGG TGTTCAAGCC ACGGCGGGTC GCGGCGATGC TCGCCGGGAT GGAGGTGCCG CACGCCCACA TCCACCTTTT CCCGATCGAC ACGGAGTCGC AGATGAGCTT CGCGCTCGCC GACCACAACC CCGATCCGGC GATGATGGAC GACGTCGCCG AGCGCCTGCG GGCGGCCCTG GCGGAGCCGC GCCGGGTCTA G
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Protein sequence | MASVFTRIIN GELPGRIVYS DESAVAFLSI APVRPGHTLI VPRLEIDHWI DLPDETVRAV WSAAAVVGRA IDTVFKPRRV AAMLAGMEVP HAHIHLFPID TESQMSFALA DHNPDPAMMD DVAERLRAAL AEPRRV
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