Gene Franean1_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1799 
Symbol 
ID5670201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2161901 
End bp2162140 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content77% 
IMG OID641240720 
ProductSirA family protein 
Protein accessionYP_001506143 
Protein GI158313635 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.297701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACG GCTCGCCGGC GGCGGTCGTG GACGCGCGCG GGCGGCGCTG CCCCATCCCG 
ATCATCGAGC TCGCGCGGCG GATCGGCGAC GTCGATGTGG GCGAGATCAT CGAGCTGCTC
GCCGACGACC CGGCTGCCGC GGCCGACGTG GCCGCCTGGT GCCGGATGCG GGGCCACGAC
CTGCTCACCG CCGCACCCGG CGCTGGGCCG GGCTCCTACC TCGTCCGCCG CCTGGGCTGA
 
Protein sequence
MNDGSPAAVV DARGRRCPIP IIELARRIGD VDVGEIIELL ADDPAAAADV AAWCRMRGHD 
LLTAAPGAGP GSYLVRRLG