Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1785 |
Symbol | cobT |
ID | 5670187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2145461 |
End bp | 2146684 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 641240706 |
Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_001506129 |
Protein GI | 158313621 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0813034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.475687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACATCA CCCCGGCCGC CGAACCCGCC GCCGCGCCCG CGCTCGCGCC GGACGCCGTA CCGGTCGTCC CCGACCTCGA CCACGAGGCC ATGACGGCCG CGCGCCACCG GCAGGGCCTG CTCACCAAAC CGCCGGGCGC CCTGGGCCGC CTCGAGGACC TGTCGGTCTG GATCGCCGGC GCGCAGGGCA CCTGCCCGCC GCGGCCGTTG CGCCGGGTCC GGGTGGTGGT CATCGCCGGG GACCACGGCA TCGCCACGGC CGGCGTGTCC GCGTTCCCGT CCGAGGTGAC CGCGCAGATG GTCGCGAACT TCGCCGCCGG CGGCGCGGCC GTCAACGTGC TGGCCCGCCA GGTCGGCGCG TCGGTGCGGG TGGTGGACGT CGCCGTCGAC ACCCCCGTGC CCACCACGGC GGGCGGGGCG GACGGCAGCG CGCCTCCCGA GCGGTACCGG GTCCGGCGCG GGAGCGGGCG GATCGACCGG ACCGACGCAC TCACCGCCGC CGAGGTCGAC GCCGCCTTCG CCGTCGGCCG GCTGATCGCC GACGAGGAGA TCGACGCCGG CGCCGACCTG CTCGTCCCCG GCGAGATGGG CATCGGCAAC ACCACGCCCG CCGCCGCCGT GGTGGGCACG CTGCTCGACC GCGAGCCGAT CGAGGTCGTC GGCCGCGGCA CCGGCATCGA CGACGAGCGC TGGATGCTCA AGACGGCCGC GATCCGGGAC GCGATGCGCC GCGCCCGGCC GTACGCCGGC AACGCGCGCT CTGTTCTGCG GGTCGCCGGT GGGGCGGATC TCGCCGCGCT CGCCGGCCTC CTCGTCCAGG CCGGGGTGCG GCGCACGCCC GTCGTGCTCG ACGGCGTGAT CGTCTGCGCG GCGGCGCTGG CCGCCGAGAT GATCGCGCCC GGGGCGAAGC GGTGGTGGGT GGCGGGGACC CGTTCCACCG AGCCGGCGCA GCGCCTCGTC CTCGACCACC TCGGGCTGGA GCCGCTCCTG GACGCCGGCC TGCGGCTCGG GGAGGGCACC GGCGCGCTGC TGGCCGTCCC GATGCTGACG GCCGCGCAGG CCACGCTGGC CGAGATGGCG ACGTTCGACC AGGCCGGGGT GAGCGCCAAA GAGCCGGCCG CGCCCGACAC CGACACCGAC GAGCCGGGCG GCACCGGATC TGCCGAGAGC GGACCTGCCG GTGCCGGGCC ACGCGATGAC GGCACCGCCG CCGGCGCGCC GTGA
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Protein sequence | MDITPAAEPA AAPALAPDAV PVVPDLDHEA MTAARHRQGL LTKPPGALGR LEDLSVWIAG AQGTCPPRPL RRVRVVVIAG DHGIATAGVS AFPSEVTAQM VANFAAGGAA VNVLARQVGA SVRVVDVAVD TPVPTTAGGA DGSAPPERYR VRRGSGRIDR TDALTAAEVD AAFAVGRLIA DEEIDAGADL LVPGEMGIGN TTPAAAVVGT LLDREPIEVV GRGTGIDDER WMLKTAAIRD AMRRARPYAG NARSVLRVAG GADLAALAGL LVQAGVRRTP VVLDGVIVCA AALAAEMIAP GAKRWWVAGT RSTEPAQRLV LDHLGLEPLL DAGLRLGEGT GALLAVPMLT AAQATLAEMA TFDQAGVSAK EPAAPDTDTD EPGGTGSAES GPAGAGPRDD GTAAGAP
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