| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1688 |
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| Symbol | |
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| ID | 5670090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2019335 |
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| End bp | 2020273 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641240606 |
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| Product | GntR domain-containing protein |
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| Protein accession | YP_001506032 |
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| Protein GI | 158313524 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0152268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.243042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGACG GGCTATCGCC GGCCGGCCGG AATACAGCGT CCGGCGCGTT CCACGGCGCA
GCACGGACTT CTCCACGCGG CGCCGCGCCC GCTGTCGGCT CCGCCCTCGG CGGGGGGCAC
GCCGCGGGCC GCCGCGCCGG CGGCCATGCC GAGAACGGCG GGGCGATCGG CCTCGTCGTC
GGCGAGCCGG AGGAACCGAC CTCCCGCTTC GGGCAGCGCA CCCTCGCCTC CCGACTGGCC
CGCACCATCG AGCTGGAGAT CATCCGGCGC GGGTGGCCGG TCGGCGAGGG GCTCGGGTCG
GAAGCCCAGC TCATGGAGCG CTACCAGGTC GGGCGGTCGG TGCTGCGCGA GGCCGTCCGG
CTGTTGGAGA GCCGATGGGT GGCTCGGCCG CGGCCCGGTC CCGGCGGCGG CCTTGTGGTG
ACCGCGCCCG ACCACGACGG CGTCCGCGAC GTCGCCCGGG TCTACCTCGA CTTCGCCCGC
GCCCGGCCGG AGCACCTCTG CGAGACCTGG TCCGCCCTGG AGGCCGTGGC CGTCCGCAGG
CTCGCCGAAC GGATCGACAC GGCCGGCCTG ACCCGGCTGC GCGGTGCACT GCAGCCGGCC
ACGCCGGGCG GGCGGGCCGC GGGAGCGCGC TCGCGGACAC GGTCAGCCGG CACCCGGCCG
GCGCCGGTCG CGGCGGGCTC CACCGGGGAG GCCCCGGTGC TGCTGCACCT TGAGATCGCC
CGGCTGGCGG GCAATCCGGC CGCCGAGCTG TTCATCCGGG TCCTGGCGGA CCTCGCGCAT
CCCCGCGAGG AGACCGACCG GCTCGGGCAG TGGTGGCAGC ACCCGCTGCA CGCCGAGATC
GTCGACGCGA TCACCCGCGG CGAGGGCGCG CTCGCCGAGC ACCTGGCCCG GTCCTGCATC
CGGCGGCACG TCGAGGAGGC GACCGCCCAC CGGCACTGA
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| Protein sequence | MSDGLSPAGR NTASGAFHGA ARTSPRGAAP AVGSALGGGH AAGRRAGGHA ENGGAIGLVV
GEPEEPTSRF GQRTLASRLA RTIELEIIRR GWPVGEGLGS EAQLMERYQV GRSVLREAVR
LLESRWVARP RPGPGGGLVV TAPDHDGVRD VARVYLDFAR ARPEHLCETW SALEAVAVRR
LAERIDTAGL TRLRGALQPA TPGGRAAGAR SRTRSAGTRP APVAAGSTGE APVLLHLEIA
RLAGNPAAEL FIRVLADLAH PREETDRLGQ WWQHPLHAEI VDAITRGEGA LAEHLARSCI
RRHVEEATAH RH
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