| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1680 |
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| Symbol | |
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| ID | 5670082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2010238 |
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| End bp | 2012748 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641240598 |
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| Product | putative membrane transport protein |
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| Protein accession | YP_001506024 |
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| Protein GI | 158313516 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.507173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.969674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCACCT ACCTGTACCG GCTCGGCCAG GCCTCCCACC GGCACCGGCG GGTCGTCCTG
GCGCTGTGGC TGGCGCTGCT CGGGCTGGCA GGCGCGGGCA CCGCGACCAC ATCCAGCGCG
GGCACCGCGA CCACATCCAG CGCGGGCACC GCGACCACAT CCAGCGCGGG CACCGCGACG
CCCGCCGGCA CCGCAGCAGG GACTCTTGTC GCTGCGGGCT CGGAGTCGCA ACGGGCGGCC
GACCTGCTGC GGCGGCGGCT GCCGGGGACC GGTGCCGACA CCGCGACGGC CCGGCTGGTC
CTGACCCTCG ACGCGGGCGA CGGCGCCCGG GCCCGCCTCG ACGACCCGGT CCACCGGCAA
GCGATCGAGG ACGTCCTCGC CGCCCTCGGA CAGGCGCCGC TCGTCGGGCG GGTCGGTGAT
CCCTTCGGCG GCAGCGGGCC CGGCGCCGAC GGCGAGCCCG GCGCCCCCGG CGTCGGGTCC
GTCGAAGGCG GGATCTCCAG CGACAGCCGG ACGGCCTACA CACAGGTCAC CTACACCGTC
CGCGACACGC AGCTGACCGC CCGGGCGCGC GCGGCCCTGT TCGCCGCCGC GGACCCGGCC
CGCGCCGCCG GCATCGACGT CGAGTTCGGC GGGACGGCGC TGGACGGAGT ACCCGAGCGG
AGCTACCTCG GCTCCGCTGA GCCGGCTGTC GCCGCGGGCA TACTCGCGGC AGCTGTGCTC
GCGGCGGTCC TGGGTGTCCT CATCGTGGCC TTCGGCTCGT CCGTCGCGGC CGCGCTGACG
CTGCTGACGG CGGTCGTCGG CGTGACGGTC GGCGGCTGTG CGGCCTGGGT CGTGACCAGC
CGAACCGGAA CCGGCCCGGC CACGCCGCTC CCGGTGGCGG TGGCGGTGCT CGGGCTCACC
GTCGCGATCG GCGGCGCGCT GCTCGTCGTC ACCCGGTACC GGAACGGGCT GGCGGAGGGC
CGCAGGCGCG AGGAAGTGGC CGGGAACGCG GTGGCCACCG CCGGGTCGGT CGTGGTCCTC
TCGGGTCTGA TGACGGCTGG CACGCTCACG GCGCTGTCGG TCGCCCGCGT CCCGGCGCTG
ACCACGATCG GCCTGGCGTC CGCCGGCATC ATCATGATCG CCACTCTGGG CACGCTCACG
CTGCTGCCGG CCGTCCTCGG ATTCGCCGGA AGCAAAGTCA CCGCACAGGC CACCGTCCGC
GCCAGGCGCG GACGGGACGG CGGGGAGCGG TGGGGCCGGT TCGTCGTGCG GCGACGGATT
CCGGCGCTTC TGCTCTCCCT CGGCGCCGTC GCGGCGCCGG TGGCCGACCT GTGCCTGGGG
CTGCCCGACA GCGGCGCGAC CGCGTCCGAG GGCACCCAGC GCCGCGCCTA CGACCAGCTC
GCCGCGGGCT TCGGCGCCGG CTTCAACGGC CCGCTGCTGC TCGTGGTGGA CGCGGCGGGC
AGCGCCGACC CCACCGCCGC CGCCGGCCGG GTACGGACGG CGGTCGCCGC GCTGGGCGCC
GTCGCCCTGA CCACCGAACC GCGGTTCGAC CCCAGCGGCG ACCTCGCGAC CATGACCGTG
ATCCCCGTCA GCGGACCGGG CGATCCGGGC ACGGCGGACC TCGTACGCCG CATCCGCGCC
GAGGCCGGCG CGCTCGCCGT CACGACGGGC ACCCGCGTCT GGGTCACCGG GCGGACGGCG
ATCGGCCTGG ACGTCTCGTG GCGGCTCGCC CGGGTCCTGC CGCTCTACCT CACCGTGCTC
GCCGCGCTGG CGATCGCGGT GCTCGCCGTG GCCTCGCGCA GTGTCCTCGT GCCCCTGAAG
GGCGTCCTGA GCGCCGGGCT CAGCGCCGTG GCGGCCCTGG GCGCCATGGT CGCCGGGTTC
CAGTGGGGAT GGCTCGGCAG CGGCCTGGGG CTGGAACGGA GCGGGCCCGT GGCAGCCGTC
CTGCCGATCG TCGTGATCGG GCTGCTGACC GCTCTGGCCA CGAGCCACGA GCTGCACCTC
GTGGCCCGGA GCCGGGCGGA GCTCCTCCGC ACCGGCGACC CCGGCCAGGC CGTGGTGCGC
GGCACCGCGG ACGCCGCCCG GGCCGTCACG GCCAGCACGA TCATCACGGT CGTCGCGTCG
GGCGCGGTCG TGGCGGCCAG CACAGGCGTC ATGGCCGGGG TCCTCGGGGC ACTCGCCGCT
CCGGCCGGCC CGGTCACCGC GTCGATCGGT CTCGCGCTGG CGTTCGGTGT CACGGTGGAC
GCGTTCGTCG TCCGCCTGAC GCTCGGGGCA GCGGTCATGT CCCTGCTCGG GCGGGCCGTC
TGGTGGCTGC CGCGCCCGCC CGACCACCTG CCCGCGGCCG CCTCGCCCGG CCCGGCGGCG
TCCCCTCCCC TGCCCACCGA GGCGCCCGTG CCCGCCTCGA TGCCCGCGTC CGCAGCGGTG
GCGACGCCCG CTGTGGCGCC CGCGTTGGTT TCGGTACCAG GGCCCGCCGA GGTGCCCACG
CCGGTTTCGG CTGAGGCCGG CACGGGTGCC GGGGCCGGGG CGTCAGTCTG A
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| Protein sequence | MGTYLYRLGQ ASHRHRRVVL ALWLALLGLA GAGTATTSSA GTATTSSAGT ATTSSAGTAT
PAGTAAGTLV AAGSESQRAA DLLRRRLPGT GADTATARLV LTLDAGDGAR ARLDDPVHRQ
AIEDVLAALG QAPLVGRVGD PFGGSGPGAD GEPGAPGVGS VEGGISSDSR TAYTQVTYTV
RDTQLTARAR AALFAAADPA RAAGIDVEFG GTALDGVPER SYLGSAEPAV AAGILAAAVL
AAVLGVLIVA FGSSVAAALT LLTAVVGVTV GGCAAWVVTS RTGTGPATPL PVAVAVLGLT
VAIGGALLVV TRYRNGLAEG RRREEVAGNA VATAGSVVVL SGLMTAGTLT ALSVARVPAL
TTIGLASAGI IMIATLGTLT LLPAVLGFAG SKVTAQATVR ARRGRDGGER WGRFVVRRRI
PALLLSLGAV AAPVADLCLG LPDSGATASE GTQRRAYDQL AAGFGAGFNG PLLLVVDAAG
SADPTAAAGR VRTAVAALGA VALTTEPRFD PSGDLATMTV IPVSGPGDPG TADLVRRIRA
EAGALAVTTG TRVWVTGRTA IGLDVSWRLA RVLPLYLTVL AALAIAVLAV ASRSVLVPLK
GVLSAGLSAV AALGAMVAGF QWGWLGSGLG LERSGPVAAV LPIVVIGLLT ALATSHELHL
VARSRAELLR TGDPGQAVVR GTADAARAVT ASTIITVVAS GAVVAASTGV MAGVLGALAA
PAGPVTASIG LALAFGVTVD AFVVRLTLGA AVMSLLGRAV WWLPRPPDHL PAAASPGPAA
SPPLPTEAPV PASMPASAAV ATPAVAPALV SVPGPAEVPT PVSAEAGTGA GAGASV
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