| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1631 |
|---|
| Symbol | |
|---|
| ID | 5670033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 1948304 |
|---|
| End bp | 1949206 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641240549 |
|---|
| Product | 6-phosphogluconate dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001505975 |
|---|
| Protein GI | 158313467 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.586989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGCA CGAGGGCGAC GGTCGGATTC GTGGGCCTGG GGAGCATGGG CGGCGCCCTG
GCCGCGAACC TGGTCGCGGC CGGGTTCGAC GTCGTCGCCC ACGACGCGGC CGGCCCGGAT
CGGGTCCCGG TGGGAGCAGC CGGCGCGGTC GACGTCGCCG AGGTCGCCGG CCGGGCCGAC
ACCGTCGTGT TCAGCCTGCC CGACGGGGCG GCGTCCGAGC AGGTCGCCGG TGAGATCGTC
GCGCTGGCCG GCCGGCGGGC GGCGTACGTC GTCGACACCT CGACGGTCGG GGTGGCCGCC
GCGCGCCGGA TCGCCGGCCG GCTGGCCGGC GCCGGTGTCG GCTACGTCGA CGCGCCGGTG
TCGGGTGGTG TGGCGGGCGC CCGGGCGCGC ACGATCGCGG TGATGTTCGC CGGGTCCGAC
GCCGACTGCG CGGCGGTCAC GCCCGTCCTG GCCGGCCTGA GCGACCGCCG GACCAGAGTG
GGCGACGAGC CGGGCCTGGC CCAGGCGCTG AAGCTGGCGA ACAACTTCCT CTCCGCGACG
GCGCTGGCGG CGACCAGCGA GGCGATCGCC TTCGGCACCG CGGCCGGGCT CGACATGGCC
ACGATGCTCG ACGTGCTGAA CGGCGCGAGC GGCCGGAGCT CGGCGACCGG CGACAAGTTC
CCCAACCACG TACTCACCGA ACGCTACGCG GCTGGTTTCA CCAACTCGTT GATGGCGAAG
GACGTCGCGC TCTATCTGGC GGCCGTCCAG GAGCACGACG GTGCCGTGCG AAGCCCACAG
AATTCACCGA ACTCACCGAA CTCGCGGATC GGGGCGGTCA CGGCGTCGGT GTGGGAGCGG
TTCGCGGCCG CGGCACCCGG TGCCGACTTC ACCCGGATCT ATCCCTTCGT GAAGGGCACC
TGA
|
|---|
| Protein sequence | MAGTRATVGF VGLGSMGGAL AANLVAAGFD VVAHDAAGPD RVPVGAAGAV DVAEVAGRAD
TVVFSLPDGA ASEQVAGEIV ALAGRRAAYV VDTSTVGVAA ARRIAGRLAG AGVGYVDAPV
SGGVAGARAR TIAVMFAGSD ADCAAVTPVL AGLSDRRTRV GDEPGLAQAL KLANNFLSAT
ALAATSEAIA FGTAAGLDMA TMLDVLNGAS GRSSATGDKF PNHVLTERYA AGFTNSLMAK
DVALYLAAVQ EHDGAVRSPQ NSPNSPNSRI GAVTASVWER FAAAAPGADF TRIYPFVKGT
|
|---|
| |