Gene Franean1_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1617 
Symbol 
ID5670020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1935281 
End bp1935745 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content74% 
IMG OID641240536 
Producthypothetical protein 
Protein accessionYP_001505962 
Protein GI158313454 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACTTCT GGCTCCCCCG GTCCCAGGCT GGACGGCAGG ACACAGCCGA CCAGGGAGAA 
GCCATGCAGC AGCAGCACGC GGACCGCCAG GAACGGGGCT ACCAGGACTA CGAGAAGGCG
ATGCGGCCCG AGGACATCAC CCGGCTGTTC GTCGAGCGTT CCAACGCCGG TGACGCCACC
GGCGTCGCCG CGCTCTACGA GGAGAACGCG GTGCTGGCCT ACCCGCCCGG CGGCCGGACG
GTGGGCCGGG AGGCCATCCG GGAGCTGTGG GCGGCAGTGC TGGCCGGCGG CCCCCGCTTC
GAGCCGGAGC AGCCGCTGCC CACCCTGGTC AGCGGCGACA TCGCGCTCAC GTCGACGCCG
CCGAGGGACG GGACCGGCGC CAGGGCGCAG GTCGTCCGCC GCCAGCCGGA CGGGAGTTGG
CTGCGGCTGC TCGACCAGCC CGAGTTCAAC CCGCCGGCAC GCTGA
 
Protein sequence
MDFWLPRSQA GRQDTADQGE AMQQQHADRQ ERGYQDYEKA MRPEDITRLF VERSNAGDAT 
GVAALYEENA VLAYPPGGRT VGREAIRELW AAVLAGGPRF EPEQPLPTLV SGDIALTSTP
PRDGTGARAQ VVRRQPDGSW LRLLDQPEFN PPAR