| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1576 |
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| Symbol | |
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| ID | 5669979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1881760 |
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| End bp | 1884354 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240495 |
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| Product | RND superfamily drug efflux protein |
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| Protein accession | YP_001505921 |
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| Protein GI | 158313413 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0112827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGCGC GACACCGCTG GATCGTCGTC GCCCTGTGGG TGGCCGGCCT GGCGGCGCTT
CTCGTCTTTG TGCGGGACTC CGGCGCGCGC TTCAACACCG ACGTCGCCGT CCCCGGGACG
GACTCCGCGC GGGCCATGGA TCTCGTCAGC GAGGTCGTGC CCGGCGGTGG TCTCCCGGAC
ACCGAGTCGA TCGTGTTGCA CGCCCGCCGC GGGACGGTCG ACGACCCGCT GGTTCGCGAA
CAGATCGCCG CGATGGCGGC GGAGCTCGGC AAGCTGCCCA AGGTGGGCGG GGTCATCGAC
CCGTTCAACC CGGCCGGCGC GGTCGTCCTC GGCATCGAGC CGATCAGCGC GAACCGGCGC
ACCGCGGTCA CATCCGTGAT CATGAAGGGT TCGGCGCTGA ACCCGGACCG GGCCGCCGCG
CGGCGCCTCA TCGACACGGC GCGGGCCTAC GACGGGCCGG ACCTCCAGGT CGAGGCCGCC
GGCCCGGGCG CGACCGCGCT GAGCGCGACC ACGATCTCAC CGCGACCGAT CATCATCGCG
CTCGTCGCCG CCCTGCTGCT GCTCGGCGTG ACCCTGCGCT CCCGCGGCGC GGTCGCCGTC
TGCGCCGCGA CGTCCGCGGT GGCGACGGTG GCCGCCCTCG GTGCCATCGT CCTGATCTCC
CACACGATCA CGACCACCGC CTTCGCTCCG CTGCTCGCGG CCGTCGTCGC GGCCGGGACC
AGCCTCGGCG GCGCCGTCGT CGTCGTGCAC CGGGCCCAGT CCGCGCTGCG CGAGGGAGTC
GGCCCGGTCG AGGCGGCGGC GCAGGCCACC GCCCGCGCCG GCTTCGCCGT CGCCTACGGA
GGCTTCTGCG TCACCCTCGC GATGGACGGG GTGGCGCTGC TGGGGCTCAG CTTCTTCGAC
GGCGTCGCCC TGGGCACCGC TGCTGCCGGG GCGGCGACCG GTCTGGTGAT CCTCACCCTG
TTGCCCGCGC TGCTGGGGCT GAGCGGGCCG CGGCTGCTCG GCTGGACCGA ACGCCAGCAC
CTGACGACCA GCGGCCGTGG CCTGCCGCAC CGCCCGGGGC TGCGGGCCTG GTGGGCCCGA
CAGGTGGACC GCCGCCCGGC CGCCATGGCG CTCGCCGCCG GCCTCGGGCT GGTCCTGCTC
GCCGTCCCAG CCGTGACCCT CAACCTCGGC GGCGCCGACG ACGGGGCCGA GTCGACGTCC
ATGAGCACCC GGCGGGCCTA CGACCTGCTC AGCGCCGACT TCTTCCCCGG TCTGAACGGC
CCGATGCTCG TCGCGGTCGA ACGGGGCGAC GGGCCGTCCG CTGTGCCCGT GGCGGACGTG
GTGAGCGCCA TCGCGAAGAC CCCCGGCGTG GTCAAAGCGG CTGTCAACCT GGAGAAGGCC
GACGCCGGGC TCGCCGTGAT CCGGATCGCG CCGCGGGAGG GCCCGCGATC GCCGGCGGCC
GTCGACCTGC TGCACCGGCT GCGCGACGAC GTCATCCCGC GCGCCGTGGC CGGCACCGGC
TCCCGGGTGT ACATCGGCGG CTCCACGGCA CTGTTCGTCG ACATGGCGGC GGACTTCCGC
GGCGCGACGA CGCTGTTCCT ACTGGTGATC CTGCTCGTGG TCGGGGTCCT CGGCCTGCTG
ATCCTGCGCT CGGTGGAGAT CGCGGCCGCG CTGGCGGTGA CCAGCGTGCT CGCCGTGCTC
GCGGCGGCCG GCGTCCTCGC CATCCTGTTC CAGACCGACC TGCTCGCCAC GGCGCTGGGG
CTGGAGACCG GGCCGGTGGA GCCGTCCATG CTGGTACTCG TGCTGGTCGC CGTGTTCGGC
TTGTTGCCAG GCCTGAACCT CAGCCTTCTC GTCCGGCTCA TGGAACCCGC CGACCGCGCC
GGGAACGAAC CGCCCACGCG GGACGCGGAG GGCACGGGGG ATACGCAGAA CGCGGAGGGC
GCGGAGGGCG CGGAGAGTAC GCGGAACACC GGCGGGACAC GGCGCACACG GCGGCGTCGG
CGTGCCGACA CCGGGCCCGT CCGCCGCCGA TCCGCCGGTT CCCGGCTCCG TGGACGTCGC
GGCGGCACTT CGGGCCCGAT CCGGCGCCAC CGCACCGACA CCACCCCCAT CCGGCGCGGC
CACGCCGACG TCGGTCACGT CATGCTGACC ATGAACCTCG TGATGCTGTT CCTCTTCATG
GCGATCGCCG CGCAGCCCTC CCGCACCATG AAGGTCATCG GATGCGGCCT CGCGACCGGC
ATGGCCATCG ACGCGTTCGT GCTGCGGGCG ACGCTCCTGC CCGCCGTTCT CCACCTCCTG
CGTCCCACCC GGCCCGGCTC ACCCACCCGT CGCACCAGTG CGACCGGAGA TGGGACGGGG
GACGGCCGCC GCGCGGCCAG GGATGGCGGC AGGGCCACCG GGGACGGTGG TAGGGCCACC
AGGTCCGCTC GGGCCGGCCG GCGCCGCGCC CGCCCGGGGC AGCCGTCGAC ACCCGGACCG
GCCGGCGGCT CGCCCCGCCC GGTCACCCGG GTGGCGGCGT TCACCCCGAC CGCGTTCGGT
GAGGAATCTG CGCCGCGGCG TGACGGGACT GGTCGGGTCG CGCAGCCGAG CCCGCCCCGG
CACCCGGCGG GATGA
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| Protein sequence | MCARHRWIVV ALWVAGLAAL LVFVRDSGAR FNTDVAVPGT DSARAMDLVS EVVPGGGLPD
TESIVLHARR GTVDDPLVRE QIAAMAAELG KLPKVGGVID PFNPAGAVVL GIEPISANRR
TAVTSVIMKG SALNPDRAAA RRLIDTARAY DGPDLQVEAA GPGATALSAT TISPRPIIIA
LVAALLLLGV TLRSRGAVAV CAATSAVATV AALGAIVLIS HTITTTAFAP LLAAVVAAGT
SLGGAVVVVH RAQSALREGV GPVEAAAQAT ARAGFAVAYG GFCVTLAMDG VALLGLSFFD
GVALGTAAAG AATGLVILTL LPALLGLSGP RLLGWTERQH LTTSGRGLPH RPGLRAWWAR
QVDRRPAAMA LAAGLGLVLL AVPAVTLNLG GADDGAESTS MSTRRAYDLL SADFFPGLNG
PMLVAVERGD GPSAVPVADV VSAIAKTPGV VKAAVNLEKA DAGLAVIRIA PREGPRSPAA
VDLLHRLRDD VIPRAVAGTG SRVYIGGSTA LFVDMAADFR GATTLFLLVI LLVVGVLGLL
ILRSVEIAAA LAVTSVLAVL AAAGVLAILF QTDLLATALG LETGPVEPSM LVLVLVAVFG
LLPGLNLSLL VRLMEPADRA GNEPPTRDAE GTGDTQNAEG AEGAESTRNT GGTRRTRRRR
RADTGPVRRR SAGSRLRGRR GGTSGPIRRH RTDTTPIRRG HADVGHVMLT MNLVMLFLFM
AIAAQPSRTM KVIGCGLATG MAIDAFVLRA TLLPAVLHLL RPTRPGSPTR RTSATGDGTG
DGRRAARDGG RATGDGGRAT RSARAGRRRA RPGQPSTPGP AGGSPRPVTR VAAFTPTAFG
EESAPRRDGT GRVAQPSPPR HPAG
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