| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1515 |
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| Symbol | |
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| ID | 5669919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1818850 |
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| End bp | 1819539 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641240435 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001505861 |
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| Protein GI | 158313353 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000770474 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTGCGCG CAATCCTGCT CGACTTCTAC GGCACCGTCG TGACCGAAGA CGACTACACC
ATCGAGATCG TCTGCGAACA GGTCCGTGTC ACCGCCACCG GACGACCTGA CCTGACCGCC
GCGGAGGTCG GCGCCTACTG GCGACAGGTG TTCCAGGAGG AGACGGGCAG AAGCATCGCG
GAGGCGTTCC GCACCCAGCG GGACATCACC CTTTCGTCGC TGGCCCGCGC ACTACGACGC
TTCGGCTCCA CCGCCGACCC GTACATGCTG TGCACGCCAC AGTTCGACCT CTGGCGCCAG
CCGAAACTCT GCGCCGACAG CAGGGCCTTC CTGGACGCGC TCGACCTGCC GGTATGCGTC
GTGTCCAACA TCGACCGGGC GGATCTGCGC ACCGCGATCG ACCATCACCA GCTGCCACTG
GACCTGCTGG TCACCAGCGA GGACGCCCGC TGCTACAAAC CGCACCCGGC CATCTTCCAG
ACCGCGACGC GACTACTCGG GCTGCCCCCC GACGCCGTGC TCCACATCGG CGACTCGCTG
ACCTCCGACG TCGCCGGCGC CCACGCGCTG GGCATCCCCA CCATCTGGGT CAACCGGTCA
GGACGGCCCC GCCCCGCCGA CCTGACCTCG ATCGCGGAGG TCGGTGCCCT CACCGAAGCG
CTCCCGCTGC TGCAGCAGGC GCGCCGGTAG
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| Protein sequence | MLRAILLDFY GTVVTEDDYT IEIVCEQVRV TATGRPDLTA AEVGAYWRQV FQEETGRSIA
EAFRTQRDIT LSSLARALRR FGSTADPYML CTPQFDLWRQ PKLCADSRAF LDALDLPVCV
VSNIDRADLR TAIDHHQLPL DLLVTSEDAR CYKPHPAIFQ TATRLLGLPP DAVLHIGDSL
TSDVAGAHAL GIPTIWVNRS GRPRPADLTS IAEVGALTEA LPLLQQARR
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