Gene Franean1_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1480 
Symbol 
ID5669884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1771282 
End bp1771956 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content72% 
IMG OID641240400 
Producthypothetical protein 
Protein accessionYP_001505826 
Protein GI158313318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTCGT CATCCGTTGG GCGCTGGTGG CTGGACGTCC CCTATTCGGA GAAGGACCTG 
GCGAAGGCCG CAGGGGCGCG CTGGGACGCG CGAGCGCGGC GGTGGTACGC GCCTCGGCCG
GACATCCCGG CGCTGGGTCG GTGGGCGGCC CGACCGGACC TTCCCGTCCT GCTACCGGGT
GAGGACCGGT CCTTCGGCGG CGGGCTGTTC GTCGACCTGG TTCCGTCGTC GTGCTGGTTC
ACCAATGCAC GGTCCTGTGT GACCGGCGCT GATTGGGAGC GGCTGCGGCG GGCGGTCCTC
TCCCGGGCCG ACCAGCGGTG TGAGGCGTGC GGCCGCGGGC CGGACCGTGA CGCCGAGCGC
TGGCTGGAGG TCCACGAACG CTGGGATTAC GACGAGCACG CCCACGTCCA GCGTCTACGT
CGGTTGGTGT GCCTGTGCAC CGACTGCCAC ACCGCGACCC ACTTCGGCCT CGCGTCGGTG
CGCGGCCGGG ACGGCGCGGC CCTGACCCAC CTGTGCCAGG TCACCGGGCT CACTGAGGCG
CAGGCGCGCG AGCACGTGGA CGCAGCCTTC GAGCTCTGGG GCCAGCGCTC CACCACGACC
TGGGTTCTCG ACCTCAGCAT TCTGATCAAT GCGGGGATCG TCGTCACGCC GCCACCGCCG
GCGTCCGACC GGTGA
 
Protein sequence
MASSSVGRWW LDVPYSEKDL AKAAGARWDA RARRWYAPRP DIPALGRWAA RPDLPVLLPG 
EDRSFGGGLF VDLVPSSCWF TNARSCVTGA DWERLRRAVL SRADQRCEAC GRGPDRDAER
WLEVHERWDY DEHAHVQRLR RLVCLCTDCH TATHFGLASV RGRDGAALTH LCQVTGLTEA
QAREHVDAAF ELWGQRSTTT WVLDLSILIN AGIVVTPPPP ASDR