Gene Franean1_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1474 
Symbol 
ID5669878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1767477 
End bp1767890 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content66% 
IMG OID641240394 
Producthypothetical protein 
Protein accessionYP_001505820 
Protein GI158313312 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.360877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTCA TCCGGGGCCG AATACACGTG CCCCGAGGTC TGGCCGTGAC GGAGGTCGAT 
GGCGCTGCGG CACTGGTCGG CTGGTACCGG CATCGAGGCT CGACCTGGCT GCCGCCTCGA
ATGCGTCCCT GGGCCAACCG GATGGGGGTC GACATCACCA GCCTCGACGT CCGCGACCTC
GGCTACCGAT GGGGCTCGCT CGGTACCACC GGCCGGATCA ACATCCACTG GGCGACCATG
CAACTACCGG TAAGCCTCGT CGACTACGTC CTCGTCTACG AACTCGCCCA CGCCCACGCC
CACGAACGAA ACCACACACC GAACTTCTGG CGAATCGTCG AACGCACCAT GCCTGACTAC
AAGACCCGCA AGAGCAGGCT CGCCGCCCTC GGCGCCAACC TCTGGCTCGG ATAA
 
Protein sequence
MRLIRGRIHV PRGLAVTEVD GAAALVGWYR HRGSTWLPPR MRPWANRMGV DITSLDVRDL 
GYRWGSLGTT GRINIHWATM QLPVSLVDYV LVYELAHAHA HERNHTPNFW RIVERTMPDY
KTRKSRLAAL GANLWLG