Gene Franean1_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1441 
Symbol 
ID5669846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1735090 
End bp1735893 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content71% 
IMG OID641240362 
Productalpha/beta hydrolase fold 
Protein accessionYP_001505789 
Protein GI158313281 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.481122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGG TGACAGCCAA CGGAATCGAG ATCTACTACG AACGGCGTGG CACCGGCCCG 
GCACTGCTCT ACCTGAACGG TTCCGGCACC ACGCTGGCGA CGACAGGACG GCTACTCGCC
CCGTTCGCCG CGCACTTCGA CCTGCTCGCC CATGACCAGC GCGGCCTCGG CATGACCGCG
GTACCACCCG GCCCCTACTC GATGGCCGAC TACGCGGCGG ACGCCGCCAG CCTGCTCGAC
CAGGTCGGCT GGGAGCGGTG CCGGGTGGTC GGCATCAGCT TCGGCGGGAT GGTCGCCCAG
GAACTGGCCG TAACCTGGCC GGAGCGGATC GAGCGGCTGG CGCTGCTGTG CACCTCGGCC
GGTGGCGACG GTGGATCGTC GTACCCCCTT GACGAGCTCG ACAGGCTCGC CCCCACCGAA
CGGGCGGCGC TGGCACCGCG GCTGCTTGAC TCGCGTTTCA CCCCCGAATG GCTGGCTTCG
CATCCCGCCG ACCGGATGAC GGCGGACGGC ATGGCCGGGC GTGCCTCAAC GCCGCGCACC
GACGAACAGC GACGCGGGGA GACCGCGCAG CTTGAGGCCC GCCGACACCA CGATGTGTTC
GACCGGCTCG GCGCGATCAC CTGCCCGACC CTGGTCGCCT GCGGCCGCTA CGACGGAATC
GCGCCCGCCG CGAACAGCGA GGCGATCGCC AGCCGGATCC CCACCGCCAC GCTGCGCGCC
TACGAAGGCG GCCACACCTT CTTCGCTCAG GACGTCCAGG CGTTCCCCGA CGTCATCTCG
TTCCTGGCCG GCCCGAACCC CTGA
 
Protein sequence
MPTVTANGIE IYYERRGTGP ALLYLNGSGT TLATTGRLLA PFAAHFDLLA HDQRGLGMTA 
VPPGPYSMAD YAADAASLLD QVGWERCRVV GISFGGMVAQ ELAVTWPERI ERLALLCTSA
GGDGGSSYPL DELDRLAPTE RAALAPRLLD SRFTPEWLAS HPADRMTADG MAGRASTPRT
DEQRRGETAQ LEARRHHDVF DRLGAITCPT LVACGRYDGI APAANSEAIA SRIPTATLRA
YEGGHTFFAQ DVQAFPDVIS FLAGPNP