| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1393 |
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| Symbol | |
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| ID | 5675679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1686128 |
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| End bp | 1686391 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641240318 |
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| Product | CRISPR-associated Cas2 family protein |
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| Protein accession | YP_001505745 |
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| Protein GI | 158313237 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.128319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGTCA TCCTCGTCTA CGACACAGCG GCGGAGCGAA ACCCGCTGGT CCTGCGGACC
TGCCGGAAGT ACCTCCACTG GGTGCAGAGG AGCGTCTTCG AAGGCGAGCT TTCAGCCGCC
CAGTACCGAG CCCTGACCGC AGCGCTCAAG ACCGAACTCG ATCTCAGCTA CGACAGCATC
CGGATCTACC GCACGCGGAC ACCCCACCTC GTCGAGACCG AGTGGCTCGG CCAGCAGATG
GGCAATCAGG ACTCGATCCT CTGA
|
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| Protein sequence | MFVILVYDTA AERNPLVLRT CRKYLHWVQR SVFEGELSAA QYRALTAALK TELDLSYDSI
RIYRTRTPHL VETEWLGQQM GNQDSIL
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