Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1380 |
Symbol | |
ID | 5669788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 1670392 |
End bp | 1671186 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641240306 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001505733 |
Protein GI | 158313225 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCCGGT GGCAGGAGGC CTCGCCGCTG ATGGCGGGTC TGGCCGGGGC CGAGGAGGTC GTCGACGGCT GTGGTCGGGA CCGGACGGTC CCGGACGCGG TGGCGAACGG CCGGCTGCTG TTCCTGCTGT GCCGCGCCTG CGAGGGCGAC CAGGCCGCCA CGCGAGTCGC GGTCGCCCGG GTGGTCCCGG CGCTGGTCAC CAAAGCGGCG GCGCACTGCC GGACCGCCGG ACGCGGCTTC GACGCGGTCT TCGACGACCT GCTGGCGGCG GCGTGGATCG TGGTCGCGAC CTACCCGGTG GCCCGCCGGC CCGAGAAGAC GTGGATCAAC ATCGTCCTCG ACACCGAACG GGCGGTGTTC GGCCGGTCCC GGCTGGTCGA CCGGCTGACG GTGCTCCTCC CGCCGCCGAT CCTCGCCGAG CATCTGACGG CCCGCACGTC CGCCGGCACC GGTCGCGGCA ACACCGGCAC CGGTCGCGCC CGGGACCCGT TGCTGGAGCT GGTCGAGTTG CTGGCCGAAG GCCGTCGCCT GGGGCTGTCG GATGCTGCCC TGCGCATCCT GGTCGAGTTC GGTGTCGACG GCCTGAGCTC CCAGCAGGTG GCGGCCCGAG ACGGCGTGAC CGACCGGGCG GTGCGCCTGC GCCGCCAGCG GGCCGCCGCG GAACTGGCCA CCCTGCTCGG CCTCCGCGAC GGCGGCGGCC AGCACCAGCC GGCGCGCACC CGCGACACCG ACGGAAGCGG CGTCCAGCGG CGGACGCCCG CCAGGCGGCC CCGGCCGGAT GGGCGGGCGG CATGA
|
Protein sequence | MSRWQEASPL MAGLAGAEEV VDGCGRDRTV PDAVANGRLL FLLCRACEGD QAATRVAVAR VVPALVTKAA AHCRTAGRGF DAVFDDLLAA AWIVVATYPV ARRPEKTWIN IVLDTERAVF GRSRLVDRLT VLLPPPILAE HLTARTSAGT GRGNTGTGRA RDPLLELVEL LAEGRRLGLS DAALRILVEF GVDGLSSQQV AARDGVTDRA VRLRRQRAAA ELATLLGLRD GGGQHQPART RDTDGSGVQR RTPARRPRPD GRAA
|
| |