Gene Franean1_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1358 
Symbol 
ID5669767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1640459 
End bp1641124 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content74% 
IMG OID641240285 
ProductSAF domain-containing protein 
Protein accessionYP_001505712 
Protein GI158313204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAA CGGTCGATGC CCCCAGACCG TTCGCACCCA CGACTGGCAG CACGCCGCAG 
CCGAGGCGGC GGCAATCACG CCGCGGCATG GCCGTGGCGG CGCTGCTGGT CGTGATGGGC
GCGGGCACCG GCGCCTGGGC GGTGACGTCG TCGGGTGACA AGGCGGATGC CGTGGTGCTG
ACTCGTCCGC TCAACCGCGG CGAGCTGATC GAGACCGGGG ACCTGGCAAT CGCCCGAGTC
TCGGTCGAGG GGACGGGAGT CCGGCTGGCA TCGCCGCAGG CGGCACGAGA GTCCCTGGTC
GGCCGGCAGG CGCTGCTCGA TCTGCCCGCC GGAACGCTGG TCACCCCGGA AATGGCCGGC
TCGGCGCTGC CGCCGGCGGG TCTGGCCAGG GTGGGCCTGC GGCTGGCGCC CGAGGCGCTG
CCGTCCGCGC AGATCCAGCC GGGCGACTGG GTCCAGGTGG TGTACCCCGA TGGTGTCTCC
GGCGAGCCGA CCTTGATCGG AGACGCGGTC CAGGTCGCCG CGGTGGAGCC CGCGGAGACC
GACGGCACCG GCGGGGACGG GGACACAGTG GTGTATCTGG ACGCGCCCGC GGACGCCGCC
GCGTGGATCG CCACGGCGTC CGCGCAGTCA CCGCAGAAGC TGCGGCTGCT GGGGGTGCGA
CGATGA
 
Protein sequence
MATTVDAPRP FAPTTGSTPQ PRRRQSRRGM AVAALLVVMG AGTGAWAVTS SGDKADAVVL 
TRPLNRGELI ETGDLAIARV SVEGTGVRLA SPQAARESLV GRQALLDLPA GTLVTPEMAG
SALPPAGLAR VGLRLAPEAL PSAQIQPGDW VQVVYPDGVS GEPTLIGDAV QVAAVEPAET
DGTGGDGDTV VYLDAPADAA AWIATASAQS PQKLRLLGVR R