Gene Franean1_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1357 
Symbol 
ID5669766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1639496 
End bp1640392 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID641240284 
Producthypothetical protein 
Protein accessionYP_001505711 
Protein GI158313203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGGC GAGAACCGGT GCCCGCCGCA ATAAGCCGCC GGCTCCGGAG CCGCCGGCTC 
GGGCATCGCC ATCTCGTCGT GGCCGCCTGC GTCGCCGTCT GGCTGTTCAC GGGGGTGGTA
CCGGCCTGGT CCAGCACGGG CCGCGGAACG GAAAGGCATG CCGAGGCCAT GGGTAACTCC
GATCCCGCGC TGGGGCGGAT CGAGGCCATG GCCGGAGCGA CGACCACCCC GCCGGACACG
GGCGGCGAAG GCGGCAACGG AGCACCGGAG CCGTGCCAGT GGTATCCGGC AGACCTTTAC
CTCTACCTGC AAGCGGTACC AGGCCCGACG GAGCGCACCG CGCCGGCCGG GACGCGGGAG
GTCCTCTACG CGCGCGTCTG CGACCCCGCG AACGTCACCT ACCACTGGTT GCGCGACATC
GTTGATCCAC AACAGGCGGT CGTGATGGCT ATGGCGATCG CGCAGGAACG GATCCCTGCC
CCGGCGGCGG TGTTCGCTCC CGATATCGAA CGCGGAGCTT TCGTGAAGGC CCCGATGCGC
TTCGGGATCA CGAACGGACG CCCGGTCTCG GCCAGCGCAT CCGTCCCCGG AGTGACAGCA
ACGGTCACAG CAACACCACG GCGACTGGAA TTCACCCCCG GCGACGGTTC GCCTCCTGCT
GGCTGTGATG TCGCCGTCCT CGGCGCAGAC CAGCCGGCCG CGGCCTGCAC ATACACCTAC
CGGGACTCCT CGATTGTCGC CCCGAACGGC GAGTACTGGC CGGCGCAGCT TCGCGTCGAG
TGGGTGGTGG GGTGGACCGC CACGACGGGA GCGGGCGGTG ATCTCCCGAC GGTCACGACG
ACAGCGGACT ACGCGGTGCC GGTCCGGGAG ATCCAGGCGC TGGAGCACGC GAACTGA
 
Protein sequence
MDGREPVPAA ISRRLRSRRL GHRHLVVAAC VAVWLFTGVV PAWSSTGRGT ERHAEAMGNS 
DPALGRIEAM AGATTTPPDT GGEGGNGAPE PCQWYPADLY LYLQAVPGPT ERTAPAGTRE
VLYARVCDPA NVTYHWLRDI VDPQQAVVMA MAIAQERIPA PAAVFAPDIE RGAFVKAPMR
FGITNGRPVS ASASVPGVTA TVTATPRRLE FTPGDGSPPA GCDVAVLGAD QPAAACTYTY
RDSSIVAPNG EYWPAQLRVE WVVGWTATTG AGGDLPTVTT TADYAVPVRE IQALEHAN