Gene Franean1_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1315 
Symbol 
ID5669727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1586610 
End bp1587101 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content76% 
IMG OID641240246 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001505674 
Protein GI158313166 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.9488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGTGC GCGCTGACCG GGGGCGACGC GGCCCCGGCG GCCGGCGGAC GTCCACGCAT 
GCCGGCGGTG CCACGCCGGG GTCAGGTGCC GGGTCCGGGC CTGGCTCCGG CTCCGGCTCC
GGCTCCGGCT CCGGGCAGGC TGCGGCCGGT GTGCCGGAGG AGCTCGCCGC CATCCTGGAA
CTGCTGGGGC GCCGGTACGC GCTGGCCGCC TTCTGGAGCC TTCGCGGCGG TTCGTCCTCC
TTCCGGTCTC TCGCCGGACG GGTCGGCGCG CCGGAGTCCC AGCTCTCGCA GCGGATGCGC
GAGCTGCGCG AAGCCGGCCT GGTCGAGGTC GACGAGGTCG GCGAGTACCG CCTGACCAGC
CATGGGCGCC GGCTGTTGGG CGTTCTGGAG CCGCTGTCCG CCTGGGCCCA GGACTGGGTC
GCGCTGAGTC CACGCCAACG GATCCCGAAG GGCTCCGCCA GCCACGCGAC GGACGAACCG
GACCCCGAAT GA
 
Protein sequence
MSVRADRGRR GPGGRRTSTH AGGATPGSGA GSGPGSGSGS GSGSGQAAAG VPEELAAILE 
LLGRRYALAA FWSLRGGSSS FRSLAGRVGA PESQLSQRMR ELREAGLVEV DEVGEYRLTS
HGRRLLGVLE PLSAWAQDWV ALSPRQRIPK GSASHATDEP DPE