Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1315 |
Symbol | |
ID | 5669727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1586610 |
End bp | 1587101 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641240246 |
Product | HxlR family transcriptional regulator |
Protein accession | YP_001505674 |
Protein GI | 158313166 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.9488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGTGC GCGCTGACCG GGGGCGACGC GGCCCCGGCG GCCGGCGGAC GTCCACGCAT GCCGGCGGTG CCACGCCGGG GTCAGGTGCC GGGTCCGGGC CTGGCTCCGG CTCCGGCTCC GGCTCCGGCT CCGGGCAGGC TGCGGCCGGT GTGCCGGAGG AGCTCGCCGC CATCCTGGAA CTGCTGGGGC GCCGGTACGC GCTGGCCGCC TTCTGGAGCC TTCGCGGCGG TTCGTCCTCC TTCCGGTCTC TCGCCGGACG GGTCGGCGCG CCGGAGTCCC AGCTCTCGCA GCGGATGCGC GAGCTGCGCG AAGCCGGCCT GGTCGAGGTC GACGAGGTCG GCGAGTACCG CCTGACCAGC CATGGGCGCC GGCTGTTGGG CGTTCTGGAG CCGCTGTCCG CCTGGGCCCA GGACTGGGTC GCGCTGAGTC CACGCCAACG GATCCCGAAG GGCTCCGCCA GCCACGCGAC GGACGAACCG GACCCCGAAT GA
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Protein sequence | MSVRADRGRR GPGGRRTSTH AGGATPGSGA GSGPGSGSGS GSGSGQAAAG VPEELAAILE LLGRRYALAA FWSLRGGSSS FRSLAGRVGA PESQLSQRMR ELREAGLVEV DEVGEYRLTS HGRRLLGVLE PLSAWAQDWV ALSPRQRIPK GSASHATDEP DPE
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