| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1283 |
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| Symbol | |
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| ID | 5669696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1546753 |
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| End bp | 1550016 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240215 |
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| Product | ABC transporter related |
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| Protein accession | YP_001505643 |
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| Protein GI | 158313135 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.887426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.865283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGACG TCATGGGCTA CGCCCTGTTG AGCCTGGGTG CCGGCGCGCT GTACGCGCTC
GTCGCCACCG GCGTGGTCGT GATCCAGCGC GGTGCCGGCG TGTTGAACAT GGCGCAGGGC
GCGCTGCTGG CGTGGGCCGC GTACGCGTTC CACGGGGCGC GCGACGAGTG GGGTCTGCCC
GCGGCGCCGG CGGCGGTGCT CGCCGTCGGG TCGACGATGG CGGTCGGCCT GGTGTTCCAC
CAGCTGGTAC TCCGCCCGAT GCGCCAGGCC ACGGCCGTGC TGCGCCTGAT GGCCACGCTC
GGCCTGCTGA TCGTCATCCA GTCGCTGCTG ACCCTGATGT ACGGCGGGGA TGTCCGGCGT
TCGCCCACCG TGCTGCCGAC CGGCAAGGTG ACCCTGTTCG ACACCGCGGT CGGGGTGGAC
GTCCTGGTGC GGCTCGCCGT GGTGGCTGCC GTCGTGGCGG GGCTGTGGGC GGTGTTCCGG
TTCACCACGC TCGGGCTCGC GGCGACCGCG GTGACGGAGA ATCCGCAGGC CGCGGCGTCG
CTGGGCTGGT CGCCGGACGC GGTGGCGAGC TGGGCGTGGC TGGCCGGGTC GGCGCTGGCG
GGGCTGGGCG GTGTGCTGCT CGCGCCGCTG CAGAATCCGT TGTCGGCCGG TGGTCTGATG
CTGCTGATCG TCCCGGGGCT GGCGGTGGCG CTGGTCGCCC GGTTCCGGTC GCTGCCGGCG
GTGCTGGTGG GGGCGCTGGC GCTGGGCATC GTGGAGCTGG AGACCCAGGT CTACCTGGTC
GCGGACCATC CCGCCTGGCG GGGTGTCGAC CGTGCCGTCC CGCTCGCGGT GATCGTGTTC
TACCTGGCGG TGCGCGGGCG CGGCATTCCC GACCGGGGCC ATGTCGCCGA GCGCCATCCG
GTGCTGGGTA GCGGCCGGGT GCACTGGCGG GCACTGGGGA TCACGGTCGG CTGCGCGCTT
GTCGCCGTGT GGTGGCTGCT GCCTGCGTCC TGGGTGAACG CGCTGAACGC GAACGCCATC
TGGGCGACGA TCATCCTGTC AGTCGTGGTG CTGGTCGGCT TCACCGGGCA GCTCTCGCTG
GCGCAGCTCG CCTTCTCCGG GATCGCGGCA CTGATCGCCG GACGGCTGGT CGCCACCCGG
GGCTGGCCGC TGGAGGCTGC CCTCGTGGTG GGCGTCGCCG GGACGGCGGT CGTCGGCGTG
CTGTTCGCGC TGCCGGCGCT GCGCACCCGG GGCCTGCAAC TGGCCGTCGT GACGCTCGGC
CTCGGTGCTG CCGTGGACGC GCTGCTGTTC CAGCGCGGTT ACCACTCGCC CGCGGCAAGC
CCGCTCGGTG CCCTCTTCGG CGATCTCGGC ACGCTCGAGG GGACGGAGGT CGGCGACGCG
ACCCTGTTCG GGATCAGTCT GGACAAGGTG ACGCACCCGC GCGGGTTCGC GACCCTGTCG
CTGCTCACGT TCGTCCTGCT CGGGCTGGCG GTGGCGAACC TGCGGCGGGG GCGCGCGGGA
CGGCGGCTGA TCGCCGTCCG GACGAACGAG CGGGCCGCGG CGGCGCTGGG CATCAGCGTG
GTCGGGGCGA AGCTTTACGC CTTCGCGCTG TCCGCCGCGA TCGCCGGCTT CGGGGGAGTG
CTGTACGCGT TCTACACCTA CGGCGAACGC GGCAACATCG ACTACGGCGG CGGCCTGTTC
TCGCCGTTCG CCTCGATCCT GCTGATCGCC TACGCGGTCG TCGGGGGAGT CGGCTGGATC
AGCGGTTCCT TCGCCGGCGC GACGATGGCC GCCGAGGCGC TGGCGACGAG AGCCGGGGCC
TGGGTCGGCA GCGTCCTCGG CCAGCTCGGC CTGCTGCTGC GCCTGCTCTT CGCCGCGGCC
GCCGGCCTGC TGGGCCTCGC GGTCGGCCGC GCCGTCGTGC CAGGTACGGG GCCGACAGTG
CCGGCCGCAG GCGGGACGGC GCCGGGCGCG GTGCGGGCCG CGCACCTGCG GCGGGCGGCG
CCGTGGGTGG TGACCGCGGC CTTCGCCGGA GCCGCCTTCG CGGGCGGGGG CAGGGTCGTC
GACTGGCTGG CCGACCTTGA CCGCTACGTC CCGCTGATCG GCGGCCTGGT GCTGGTCACG
GTCCTCTCCC GGTCCGGTGG TGGGATGGCG CCGGAGAACG CCCGTACCGC CCGCCGGATC
CTGGAGCGCC GCTTCCCGAA GGCCGTCGAG CGGCGGATGG CCGCCGATGC GGCCCGGGTC
GCCCGCCTGC TCGGCCCCGC TCCGACCCTC GGCCCCACTC CGACCCTCGA ACCAGCTCTC
GCCACCCCGA ACGCCACCAA TGCCTCCGCT CCCGCCGCAG CGGCGGGCCC GGCGACGGGA
CCGATCCGCC GGGTCGGCAC GGTCGCCTAC CCGGCCCGGC CGGCCACGCT GTCGGTCTGG
GGACTGTCGG TGAGCTTCGG GCCGGTGGCT GCGGTCCGCT CGGTCGACCT GCGGGTCGAG
CCGGGACGGG TCGTCGGCGT GATCGGCCCG AACGGTGCGG GCAAGACGAC GGTGATCGAC
GCGATCACCG GCTACACCTC GTCCGTCTCG CGGTCCCTGA TGCTCGGCGA CACCCGGCTC
GACCGGCTGC CGGCCCACCT GCGTGCCCGT GCCGGGATCA GCCGGTCGTT CCAGAACCTC
GAGCTTTTCG AGGATCTCAC GGTCATCGAG AACATCCAGG CCGCCTGCGA CCCGCGGGAC
GCCCGTGCCT ACGCCGGTGA CCTGGTGCTG CCGCGCTCCC GGCCGCTGCC CGCCGCGGCC
GCCGCCGCCG TGGAGGCCTT CGGCCTGCGC GAGGACCTGC TCCGCACGGT CTCTGAGCTC
TCCTACGGCC GCCGCCGGCT GCTGGCGATC GCCCGCGCGG TGGCGACCTG CCCGTCCGTG
CTGCTGCTGG ACGAGCCGTG CGCGGGGCTC GACGAGAACG AGAGCGCCGG GGTGGCGACG
CTGCTGCGGC GGCTGGCGGA CAACTGGGGG CTGGGAATCC TGCTCAACGA GCACGACATG
GACGTGGTGA TGCGGATCTG CGACCAGGTG GTCGTTCTCG ACGGCGGTGA GGTGATCGCG
CAGGGCACCC CGGGCCAGGT ACGGGTCGAC CCGCGGGTGC GCCGGGCCTA CCTGGGCGCG
GCGACCGGCA CCGGCCGCAC ACCGGCGGCA GGCACGCCCG GCTCGGCGGG TGCGGCAGCC
GGCGCGACAG GCACGGCCAG CTCGCCGGGA ACAGCGGGTA CGGCCGCCAG CGCCACGCGA
CCGGCTGGCC GGGGCCGGCG GTGA
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| Protein sequence | MDDVMGYALL SLGAGALYAL VATGVVVIQR GAGVLNMAQG ALLAWAAYAF HGARDEWGLP
AAPAAVLAVG STMAVGLVFH QLVLRPMRQA TAVLRLMATL GLLIVIQSLL TLMYGGDVRR
SPTVLPTGKV TLFDTAVGVD VLVRLAVVAA VVAGLWAVFR FTTLGLAATA VTENPQAAAS
LGWSPDAVAS WAWLAGSALA GLGGVLLAPL QNPLSAGGLM LLIVPGLAVA LVARFRSLPA
VLVGALALGI VELETQVYLV ADHPAWRGVD RAVPLAVIVF YLAVRGRGIP DRGHVAERHP
VLGSGRVHWR ALGITVGCAL VAVWWLLPAS WVNALNANAI WATIILSVVV LVGFTGQLSL
AQLAFSGIAA LIAGRLVATR GWPLEAALVV GVAGTAVVGV LFALPALRTR GLQLAVVTLG
LGAAVDALLF QRGYHSPAAS PLGALFGDLG TLEGTEVGDA TLFGISLDKV THPRGFATLS
LLTFVLLGLA VANLRRGRAG RRLIAVRTNE RAAAALGISV VGAKLYAFAL SAAIAGFGGV
LYAFYTYGER GNIDYGGGLF SPFASILLIA YAVVGGVGWI SGSFAGATMA AEALATRAGA
WVGSVLGQLG LLLRLLFAAA AGLLGLAVGR AVVPGTGPTV PAAGGTAPGA VRAAHLRRAA
PWVVTAAFAG AAFAGGGRVV DWLADLDRYV PLIGGLVLVT VLSRSGGGMA PENARTARRI
LERRFPKAVE RRMAADAARV ARLLGPAPTL GPTPTLEPAL ATPNATNASA PAAAAGPATG
PIRRVGTVAY PARPATLSVW GLSVSFGPVA AVRSVDLRVE PGRVVGVIGP NGAGKTTVID
AITGYTSSVS RSLMLGDTRL DRLPAHLRAR AGISRSFQNL ELFEDLTVIE NIQAACDPRD
ARAYAGDLVL PRSRPLPAAA AAAVEAFGLR EDLLRTVSEL SYGRRRLLAI ARAVATCPSV
LLLDEPCAGL DENESAGVAT LLRRLADNWG LGILLNEHDM DVVMRICDQV VVLDGGEVIA
QGTPGQVRVD PRVRRAYLGA ATGTGRTPAA GTPGSAGAAA GATGTASSPG TAGTAASATR
PAGRGRR
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