Gene Franean1_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1171 
Symbol 
ID5669584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1395272 
End bp1396123 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content73% 
IMG OID641240103 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001505531 
Protein GI158313023 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.140148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTGC CGCTTCGCTC CGCTCCGACC CGGCTGCTCG ACGATCGGGA TCTTCCCGCG 
GTCACCGAAC TGCTGGGCCG CAACCCGGTA GCCGATGTCT TCGTCGCGTC GCGGGTGGCG
GCGTGTGGTC TGGATCCCTG GCGCCTGGGG GCCGAGGTGT GGGGCCACAC GGTCGACGGA
ACCCTGACCG CCGTGTGTTA TTCCGGCGCG AACCTGTGGC CGGTGGCGGC GGGCCCGGCC
TCGGCGAAGC TGTTCGCCGA GCGGGCCCGC CGGCAGGGCC GCCGCTGCTC GTCGATCGTG
GGTGTCGGCT CGGCCGTCAC CGCCATGTGG CGGCACCTGG AGCCGGTGTG GGGCCCGGCC
CGGGAGATCC GCGCCGACCA GCCGTTACTC GCGATCCAGG CCCCGCCGCT CATCGCGCCG
GACCCGGCGG TCCGCCAGGT CCGGCCGGAC GAGCTGGACG TGCTGCTCCC AGCCTGCATC
GCCATGTTCA CCGAGGAGAT CGGCGTCTCC CCGGTCGGCG CGGACGGCGG CGCGCTCTAC
CGTTCGCGGG TCGCCGAGTT CGTCGGCCAG CGCCGCTCGT TCGCCCACAT CGAGGACGGC
CGGGTGCTGT TCAAGGCCGA GATCGGCGCG GTAGCCGGCG ACGTCTGCCA GATCCAGGGC
GTCTGGGTCG ATCCGGCCCT GCGTGGCCGT GGCCTCGGCG CCGCCGGGAC GGCCAGCGTC
GTGGCACTCG CCCAGGCGGC GTTCGCGCCG GTGGTCAGCC TGTACGTGAA CGACTTCAAC
CACCCCGCCC GGCGCGCCTA CGAGCGCGTG GGGTTCGAGC AGGTGGGCAC CTTCGCCTCG
ATCCTGTTCT GA
 
Protein sequence
MGLPLRSAPT RLLDDRDLPA VTELLGRNPV ADVFVASRVA ACGLDPWRLG AEVWGHTVDG 
TLTAVCYSGA NLWPVAAGPA SAKLFAERAR RQGRRCSSIV GVGSAVTAMW RHLEPVWGPA
REIRADQPLL AIQAPPLIAP DPAVRQVRPD ELDVLLPACI AMFTEEIGVS PVGADGGALY
RSRVAEFVGQ RRSFAHIEDG RVLFKAEIGA VAGDVCQIQG VWVDPALRGR GLGAAGTASV
VALAQAAFAP VVSLYVNDFN HPARRAYERV GFEQVGTFAS ILF