| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1168 |
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| Symbol | |
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| ID | 5669581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1391425 |
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| End bp | 1392720 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240100 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001505528 |
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| Protein GI | 158313020 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.289129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAA CAGGCCTCGG TCGAAGCGTC GAAGGGCCTG CGAGAATAGG CAGCGTGGCG
GAGGCTTCGG TCCAGCGTGA GGTTGTTCTG CTCGGGTCCA CCGGCTCGAT CGGGACTCAG
GCGATAGATG TCGTACGCCG CAACCCGGAC AGGTTCCGGG TGGTGGCGCT GATGGGAGGC
GGGTCGCGGG TCGACCTGCT CGCGGCGCAG GCGCTCGACC TGGGGGTCGA GGCGGTCGGT
GTGGCCGCGG CCTCGTCGGC GCAGGACCTT CAGCTCGCGT TCTTCGCGGA GGCGTCCAAG
CGCGGCTACC GCCGTGGCGA GTTCGCCGTC CCGAAGATCC TCGCGGGGCC GGACGCGGCC
GTCGAGATCG CGTCCTGGCC GGCGGACATC GTCCTCAACG GGGTGTCCGG CTCGGTCGGG
CTCGCGCCGA CGCTGGCGGC TCTCAAGGCC GGCGCGACGG TGGGGCTGGC GAACAAGGAG
TCGCTGGTCG CGGGTGGTCC GCTGGTGCTC GACGCGCTCG GCGGCAACCC GGACCGGCTC
GTCCCAGTGG ATTCCGAGCA CTCGGCGCTC GCGCAGTGCC TGCGCGGGGG TCGGCGTGAG
GAAGTCCACA AGCTGGTGCT GACCGCCAGC GGCGGGCCCT TCCGTGGCCG GAGCAGGGAC
GACCTGGCCG GGGTCACCCG GGAGCAGGCA CTGGCCCATC CGACCTGGGC GATGGGGCCG
CTGGTCACGA TCAACTCGGC GACGCTGATG AACAAGGGCC TCGAGCTGAT CGAGGCCCAC
CTGTTCTTCG GTGTGCCGTA TGACGACATC GAGGTCGTCG TCCACCCGCA GTCGCTGGTC
CACTCGATGG TCGAGTTCAA CGACGGGTCG ACCATCGCCC AGGTGTCGCC GCCGGACATG
CGGCTCCCGA TCGCGCTGGC CCTGGGCTGG CCGGACCGGG TGCCGCTGGC CCAGCCGCCG
ATGGACTGGA CGCGCGCCCA GTCGCTGACC TTCGAGCCCC TGGACACCGT CGCGTTCCCC
GCGGTGGACC TCGCCCGGAC GGCGGGCCGC CTCGGCGGGA CCGCGCCGGC CGTGTTCAAC
GCGGCGAACG AGGAGGCCGT CGCGGCCTTC CTCGCCGGGC AGTTGCCGTT CGTCCGTATC
GTCGACCTGG TGGCCGAGGT GGTGCAGGCA CACGAGGTGA TCGCCCGTCC GACGCTGGAC
GAGGTGTTCG CCGTCGAACG TGAGGCCCGC GCCGCCGCGA ACCGCCTGAT CGAGAAGGCC
GGCGGGCATC CCGTGGCGGC CGGAGGACAT GGTTGA
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| Protein sequence | MNRTGLGRSV EGPARIGSVA EASVQREVVL LGSTGSIGTQ AIDVVRRNPD RFRVVALMGG
GSRVDLLAAQ ALDLGVEAVG VAAASSAQDL QLAFFAEASK RGYRRGEFAV PKILAGPDAA
VEIASWPADI VLNGVSGSVG LAPTLAALKA GATVGLANKE SLVAGGPLVL DALGGNPDRL
VPVDSEHSAL AQCLRGGRRE EVHKLVLTAS GGPFRGRSRD DLAGVTREQA LAHPTWAMGP
LVTINSATLM NKGLELIEAH LFFGVPYDDI EVVVHPQSLV HSMVEFNDGS TIAQVSPPDM
RLPIALALGW PDRVPLAQPP MDWTRAQSLT FEPLDTVAFP AVDLARTAGR LGGTAPAVFN
AANEEAVAAF LAGQLPFVRI VDLVAEVVQA HEVIARPTLD EVFAVEREAR AAANRLIEKA
GGHPVAAGGH G
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