Gene Franean1_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1156 
Symbol 
ID5669569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1377604 
End bp1377960 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content72% 
IMG OID641240088 
Producthypothetical protein 
Protein accessionYP_001505516 
Protein GI158313008 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0160558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0576877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTCA GTCAGCGGCT CGGCAGGTTC GGTGAGGACG TCGCCGCGCG CCACCTGAGC 
GCCGACGGTG CGGAGATCCT TGCCCGGAAC TGGCGCTGCC GGGACGGCGA GATCGACATC
GTCGCCCGCC ACGGCGACAC GCTCGTCTTC TGCGAGGTGA AGACGCGCAG CGGCGCGGAC
TACGGGAGCG GCCCGGACGC CGTGGTCGGC CGCAAGGCGG CGAGAATCCG GCGGCTGGCC
GTGCGATGGC TGGCCGAGCA CCCGCATCCA CCGGCGATCA TCCGTTTCGA CGTGCTGTCG
GTCTACCGGG AGCGGCAGGG GTCCGTCCGG GTGGAGCACC GGCGGGGTGC CTTCTGA
 
Protein sequence
MRVSQRLGRF GEDVAARHLS ADGAEILARN WRCRDGEIDI VARHGDTLVF CEVKTRSGAD 
YGSGPDAVVG RKAARIRRLA VRWLAEHPHP PAIIRFDVLS VYRERQGSVR VEHRRGAF