| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1137 |
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| Symbol | rpmF |
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| ID | 5669550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1357914 |
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| End bp | 1358084 |
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| Gene Length | 171 bp |
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| Protein Length | 56 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641240069 |
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| Product | 50S ribosomal protein L32 |
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| Protein accession | YP_001505497 |
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| Protein GI | 158312989 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0333] Ribosomal protein L32 |
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| TIGRFAM ID | [TIGR01031] ribosomal protein L32 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.131577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0222442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAGTCC CGAAGCGGCG CACCTCGCGC AGCAACACCC GGTCCCGTCG GGCGCAGTGG
AAGGCCAAGG CGCCGGCGCT GGCCAAGTGC TCGCGCGGGC ACACGATCCG GCCGCACACC
ATGTGCCCGA CCTGCGGCCG TTACAACGAT CGCCAGGTGC TCGACGTCTG A
|
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| Protein sequence | MAVPKRRTSR SNTRSRRAQW KAKAPALAKC SRGHTIRPHT MCPTCGRYND RQVLDV
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