Gene Franean1_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1129 
Symbol 
ID5669542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1350237 
End bp1350779 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content74% 
IMG OID641240061 
Producthypothetical protein 
Protein accessionYP_001505489 
Protein GI158312981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.284391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCGTC GTCCATTTCT GACTCGGCAC GACCCGTCCG CCGGCTTGTG CCCCAGGGCG 
CGGGCCGCGC GGCGGGTCCG GCTTCTCCCG CTCTGTATCG CGGGTCTGGC GGGTCTGGCG
GGTCCGCTCA CCGCGTGTGG TGGGCCTGGG CCTGTGGCGA TCACCGGCGC GCCCGTGCCG
GCCGGTGCGG ACCGGGCGTC CTGCGAGGCG CTGACCGCCG CTCTGCCCGA CTCGCTGGGT
GACGGTCTCG ACCGCCGTGA GGTGGAGCCT TCCGCTCCGA CCGCGGCGGC GTTCGGGTCC
GACCCGGTCG TTCTCACCTG TGGAGCCTCC GGCGTCGCGG CGACCTACCG GCCTGACTCG
ACCCTCTCCG AGGTCGATCA GGTCGCCTGG TTCACCGAGG ACGTCGGTTC CCAGGTCCGC
TACTCCACCC CGACCAGGAC TCCCCAGGTG GTGCTGACCC TGCCGGCGGA CCGGCAGGCG
TTCGAGGTCC TGGTGGCCCT GGCGCCGGCG GTTCGCGCGC ACACCAGGTC CACGACCGCC
TGA
 
Protein sequence
MPRRPFLTRH DPSAGLCPRA RAARRVRLLP LCIAGLAGLA GPLTACGGPG PVAITGAPVP 
AGADRASCEA LTAALPDSLG DGLDRREVEP SAPTAAAFGS DPVVLTCGAS GVAATYRPDS
TLSEVDQVAW FTEDVGSQVR YSTPTRTPQV VLTLPADRQA FEVLVALAPA VRAHTRSTTA