| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1080 |
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| Symbol | mnmA |
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| ID | 5669494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1286221 |
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| End bp | 1287288 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240012 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001505442 |
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| Protein GI | 158312934 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.997084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCGGA TGAGGGTGCT CGCGGCCATG TCGGGCGGCG TCGACTCGGC GGTGGCCGCC
GCCAGGGCCG TCGACGCCGG CCATGACGTG ACCGGCGTCC ACCTGGCGCT GTCGCGCTCG
CCCGCCTCGG ACCGGGTCGG TGCCCGTGGG TGCTGCACGC TCGAGGACGC CCGCGACGCC
CGCCGTGCCG CCGACGTGCT CGGCATCCCC TTCTACGTCT GGGATCTCGC GGAGCGTTTC
GAGACCGAGG TCATCGACGA GTTCGTCGCC GACTACTCGG CCGGGCGCAC GCCCAACCCC
TGCGTGCGCT GCAACGAGCG CATCAAGTTC GCCGCGGTGC TGGAGAAGGC GCTCGCGCTC
GGCTTCGACG CGGTCGTCAC CGGGCACCAC GCCCGGCTGG ACGAGGACGG CACGCTGCGC
CGCTCGGTGG ACCCGGCGAA GGACCAGTCG TACGTGCTCG GCACCCTGCG GCCCGAGCAG
CTCGCCGCGG CCCGGTTCCC GCTCGGCGAC TCGACGAAGG CGCAGGTCCG CGAGGAGGCC
GCGCGCCGTG GCCTCGCCGT CGCCGACAAG CCGGACAGCC ACGACATCTG TTTTGTGGCC
TCCGGGGACA CCGGCGCCTG GCTGCGCGAG CGCCTGGGGC CGCGCCCGGG CCCGGTCGTC
GACGCGGAGA CCGGCGAGAC CCTCGGCGAG CACGACGGGG CGTACGCCTT CACAGTCGGG
CAGCGCCGGG GGCTCGGGCT GGGACGTCCC GCGCCGGACG GCCGTCCGCG CTACGTGCTG
GAGATCTCCC CGGCGACGTC GACGGTGACC GTCGGCCCGT CCAGCGCGCT GGACATGCGC
AGCCTGGTCG CGGAACGGAT CGTCTGGCCC CATGACGGGC CGGTGTCGTG CACCGCGCAG
GTCCGGGCGC ACGGCGGGGT GGTCCCCGCG GTGGTGACGG CCCGGGGCGA CGAGCTCGAC
GTGCGGCTGG CGGAGCCGGT GCGCGGCACC GCGGCGGGCC AGGCCGTGGT CTTCTACGAC
GGCGACCGGG TGCTCGGCGG CGGGCGCATC CGCTCCCTGG CAGCCTGA
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| Protein sequence | MSRMRVLAAM SGGVDSAVAA ARAVDAGHDV TGVHLALSRS PASDRVGARG CCTLEDARDA
RRAADVLGIP FYVWDLAERF ETEVIDEFVA DYSAGRTPNP CVRCNERIKF AAVLEKALAL
GFDAVVTGHH ARLDEDGTLR RSVDPAKDQS YVLGTLRPEQ LAAARFPLGD STKAQVREEA
ARRGLAVADK PDSHDICFVA SGDTGAWLRE RLGPRPGPVV DAETGETLGE HDGAYAFTVG
QRRGLGLGRP APDGRPRYVL EISPATSTVT VGPSSALDMR SLVAERIVWP HDGPVSCTAQ
VRAHGGVVPA VVTARGDELD VRLAEPVRGT AAGQAVVFYD GDRVLGGGRI RSLAA
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