Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_1040 |
Symbol | |
ID | 5669454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 1219656 |
End bp | 1220363 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641239969 |
Product | putative cellulose-binding protein |
Protein accession | YP_001505402 |
Protein GI | 158312894 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.554825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.679852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAC ACAGTGACCT CATCCCGATG TCCGGCGAGG GTGACGGTGC CCCCGGCTTC GACCTGGTGC GCCGCGGTTA CGACCCACAT CAGGTGAACG CGCACGTCAA CTGGCTGGTC GAGCAGCTAC GCGAGGCCGA GTCGCACCGC GCCGCCGCCG AGGCGGCCGC CTCAGAGGCC GCCGCCGAGG CGGCGCGGGT TCGCGACGAC CTGGCCGCGA ACCGACCTGC CTGGGAGGAG TTCGGCGGCC GGATCACCCA GATCCTGCAG CTCGCAGAGG AGGAGGCGGC GACGGTTCGC GCCGAGCGGA CCCGCGACGC CGAGTCCCAG CTCGAGGAGG CCCGGCGCAT CGTCACCGAG GCCGAGCACA CCCGCGACCG CACCCTGCGG GAGGCCGACG AGCAGGCGCA GAGCATCGTC TCCTCGGCCC GCGCCGAGGC GGAGCGCGTC GTCGAGGCGG CCCGGTCGGC CGCGGCCCAG GCCGAGGAGG AGTCCGCGCG GCGCCTCGCC GAGCTGGAGC ACCAGCGCGA CCAGGTCACC GCGCAGCTCG GCGCGCTGCA CGACCAGGTG ACGGCCCAGC TCGGCGCGCT GCGCGACCGG CTCACCGCGG CGACCGCCCC GATCGAGGCG CCGTCGGCCT CCGCGCCGAG AGCACTGACG CAGGGCGAGA GCACCCCCGT CCAGACGGCG GGTTCGTCCC GCGGCTGA
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Protein sequence | MTEHSDLIPM SGEGDGAPGF DLVRRGYDPH QVNAHVNWLV EQLREAESHR AAAEAAASEA AAEAARVRDD LAANRPAWEE FGGRITQILQ LAEEEAATVR AERTRDAESQ LEEARRIVTE AEHTRDRTLR EADEQAQSIV SSARAEAERV VEAARSAAAQ AEEESARRLA ELEHQRDQVT AQLGALHDQV TAQLGALRDR LTAATAPIEA PSASAPRALT QGESTPVQTA GSSRG
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