Gene Franean1_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1040 
Symbol 
ID5669454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1219656 
End bp1220363 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content75% 
IMG OID641239969 
Productputative cellulose-binding protein 
Protein accessionYP_001505402 
Protein GI158312894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.554825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.679852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC ACAGTGACCT CATCCCGATG TCCGGCGAGG GTGACGGTGC CCCCGGCTTC 
GACCTGGTGC GCCGCGGTTA CGACCCACAT CAGGTGAACG CGCACGTCAA CTGGCTGGTC
GAGCAGCTAC GCGAGGCCGA GTCGCACCGC GCCGCCGCCG AGGCGGCCGC CTCAGAGGCC
GCCGCCGAGG CGGCGCGGGT TCGCGACGAC CTGGCCGCGA ACCGACCTGC CTGGGAGGAG
TTCGGCGGCC GGATCACCCA GATCCTGCAG CTCGCAGAGG AGGAGGCGGC GACGGTTCGC
GCCGAGCGGA CCCGCGACGC CGAGTCCCAG CTCGAGGAGG CCCGGCGCAT CGTCACCGAG
GCCGAGCACA CCCGCGACCG CACCCTGCGG GAGGCCGACG AGCAGGCGCA GAGCATCGTC
TCCTCGGCCC GCGCCGAGGC GGAGCGCGTC GTCGAGGCGG CCCGGTCGGC CGCGGCCCAG
GCCGAGGAGG AGTCCGCGCG GCGCCTCGCC GAGCTGGAGC ACCAGCGCGA CCAGGTCACC
GCGCAGCTCG GCGCGCTGCA CGACCAGGTG ACGGCCCAGC TCGGCGCGCT GCGCGACCGG
CTCACCGCGG CGACCGCCCC GATCGAGGCG CCGTCGGCCT CCGCGCCGAG AGCACTGACG
CAGGGCGAGA GCACCCCCGT CCAGACGGCG GGTTCGTCCC GCGGCTGA
 
Protein sequence
MTEHSDLIPM SGEGDGAPGF DLVRRGYDPH QVNAHVNWLV EQLREAESHR AAAEAAASEA 
AAEAARVRDD LAANRPAWEE FGGRITQILQ LAEEEAATVR AERTRDAESQ LEEARRIVTE
AEHTRDRTLR EADEQAQSIV SSARAEAERV VEAARSAAAQ AEEESARRLA ELEHQRDQVT
AQLGALHDQV TAQLGALRDR LTAATAPIEA PSASAPRALT QGESTPVQTA GSSRG