| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1037 |
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| Symbol | |
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| ID | 5669451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1216811 |
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| End bp | 1218598 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641239966 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase., 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_001505399 |
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| Protein GI | 158312891 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.533481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCAGG AGAGCACCCT CGGTGAGCTG ACGAGGATCG GGGTCATCGG GCTCGGCACC
ATGGGCGCCG GCATCGCGGA GGTGCTGGCC CGTGCTGGTA TCGACGTGGT GGGCGTCGAA
CGGGACGAGG CCGGGCTGGC CCGCGGTCGG GGCCATCTGG AGCACTCCAC GCATCGGGCG
GTCGAGCGCG GCAAGCTGAC CCCGGCCGAG CGCGAGGAGC TGCTCGGCCG CATCAGCAGT
GGCGTCGACC TGACGGCCGT CGCGGACTGT CCGCTGATCA TCGAGGCCAT CCACGAGCGG
CTGGACGCCA AGCAGGAGCT CATCGCCCGT CTCGACGAGA TCTGTCCCGC CGAGACGATC
ATCGCCAGCA ACACCAGCTC ACTGTCGGTC ACCGAGCTTG CCGCCGGCAC CCACCGGCCG
TCCAGGGTGC TCGGCACGCA CTGGTTCAAC CCGGCGCCGG TGATGGAACT TGTTGAGGTG
GTCGGGACGG TCGTCACGGA TCCTGTCGTC CTTGACGACG TCCGCGACCT GGTCGGTCGC
GTCGGGAAGA TTGCGGTCAG GGCAGGCGAC CGGGCCGGTT TCATCGCCAA CGCGCTGCTG
TTCGGCTACC TGAACAACGC GGTGCGGATG CTGGAGGCGC ACTACGCGAC CCGGGAGGAC
ATCGACGCGG CGATGCGCCT CGGCTGCGGT CACCCGATGG GGCCGCTGGC CCTGCTCGAC
CTGATCGGGC TCGACTCCGC GTACGAGATC CTCGACTCGA TGTACCACCA GTCCCGCGAT
CACCTGCATG CTCCCGCGCC GCTGCTCAAG CAGCTCGTCA CGGCCGGAAT GCTGGGCCGC
AAGACCGGTC GGGGCTTCTA CACCTACGCC GAGGCCGACT CGCCGCACGT CGTCGACGAC
GCCGCCCCGA GCGTGGTCGC CGGGGTCGAA CCCAGGCCGG TGCGCTCCGT CGGCGTCGTG
GGCACCGGGA CGATGGCCTG CGGCATCGTC GAGGTCCTGG CCCGCTCCGG TTTCGACGTG
GTGTTCCGCG CGCGGTCCGA CGACAAGGTG TCGGCCGTCC GCAAGAGACT GGTGGAGTCG
CTGGAGCGAG GCGTCCAGCG TGGACGGCTG TCCGCCGAGG AGCGTGACGC CGCGCTCGCC
CGGGTGACGG GGACGACCGA CCTCGACGCG CTCGCCGGCT GCGATCTCGT CGTCGAGGCG
GTCGTCGAGG AGCTTTCGGT GAAGCGGGCG CTGTTCGCCG CGCTCGACGA GGTGATGAAG
CCGGGGGCGG TGCTCGCGAC CACGACGTCA TCCCTGCCGG TGGTCGAGTG CGCCACGGCG
ACGACCCGTC CGCGGGACGT CGTCGGGATG CACTGGTTCA ACCCGGCGCC CGCGATGCGC
CTGATCGAGG TCGTGCCTAC GGTGCTGACC GCTCCCGATG TCACCGCGAC GGTGCTCGCG
GTCAGCCGGG CCGCCGGCAA GCACCCGGTG GTCTGCGCGG ACCGCGCCGG GTTCATCGTG
AACGCGCTGC TCTTCCCGTA CCTCAACGAC GCCGTGCGGA TGCTGGAGGC GCACTACGCC
AGCGTCGACG ACATCGACAC CGCGATGACG GTGGGCTGCG GGCATCCGAT GGGCCCGTTC
GCGCTGGCGG ACGTGGTCGG TCTCGACGTC ACACTGGCGA TCCAGCGGAC GTTGTACCTG
GAGTTCCGGG AGCCGGGCTA TGCCCCGGCC CCCCTGCTCG AGCACCTCGT GAAGGCGGGC
TACCTGGGGC GCAAGACCGG CCGGGGCTTC CGCGACCACT CGCGCTGA
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| Protein sequence | MGQESTLGEL TRIGVIGLGT MGAGIAEVLA RAGIDVVGVE RDEAGLARGR GHLEHSTHRA
VERGKLTPAE REELLGRISS GVDLTAVADC PLIIEAIHER LDAKQELIAR LDEICPAETI
IASNTSSLSV TELAAGTHRP SRVLGTHWFN PAPVMELVEV VGTVVTDPVV LDDVRDLVGR
VGKIAVRAGD RAGFIANALL FGYLNNAVRM LEAHYATRED IDAAMRLGCG HPMGPLALLD
LIGLDSAYEI LDSMYHQSRD HLHAPAPLLK QLVTAGMLGR KTGRGFYTYA EADSPHVVDD
AAPSVVAGVE PRPVRSVGVV GTGTMACGIV EVLARSGFDV VFRARSDDKV SAVRKRLVES
LERGVQRGRL SAEERDAALA RVTGTTDLDA LAGCDLVVEA VVEELSVKRA LFAALDEVMK
PGAVLATTTS SLPVVECATA TTRPRDVVGM HWFNPAPAMR LIEVVPTVLT APDVTATVLA
VSRAAGKHPV VCADRAGFIV NALLFPYLND AVRMLEAHYA SVDDIDTAMT VGCGHPMGPF
ALADVVGLDV TLAIQRTLYL EFREPGYAPA PLLEHLVKAG YLGRKTGRGF RDHSR
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