Gene Franean1_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1035 
Symbol 
ID5669449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1215227 
End bp1215757 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content77% 
IMG OID641239964 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001505397 
Protein GI158312889 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.65534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGAAC CGGCGGCCGC CCCCACTCCC CAGCCGCAGC CTCCGCCGCG GCCGTCGCTG 
GAGGACGCGG TGGCGCTGGC GGCCCGGGCC CACACCGGCC AGCTCGACAA GGCGGGCGAC
GAGTACATCG GTCACCCGCT GCGGGTGATG GACACCGTCG GCCGCACGGC CCCCGCCGCC
GGGGTGGACC CGTCCCTCGC GCAGATGGCC GCCATCCTGC ACGACGTGGT CGAGGACAGC
GAGGTCACGC TCGACGACCT CGCCGCCTCC GGGTACCCGC CGGCGGTCGT CGCCGCGGTG
GACGCGCTCT CCCACCGCGA GGGTGAGCCG CAGGAGGCCT ACCTGGCCCG GGTCGCCGCC
GACCGCATCG CCGTCGTCGT CAAGCGGGCC GACATGGCCG ACAACTCCGA CCCGCTCCGC
CTCGGACGGC TCCCCGCCGA GGACGCCCAG CGGCTCACCA CCCGCTACGC GGGCCGCCGC
CGGCTGCTCG ACGACCTCGT CCTGCGGAAC GCGGGTACCC GGTCCAGGTG A
 
Protein sequence
MPEPAAAPTP QPQPPPRPSL EDAVALAARA HTGQLDKAGD EYIGHPLRVM DTVGRTAPAA 
GVDPSLAQMA AILHDVVEDS EVTLDDLAAS GYPPAVVAAV DALSHREGEP QEAYLARVAA
DRIAVVVKRA DMADNSDPLR LGRLPAEDAQ RLTTRYAGRR RLLDDLVLRN AGTRSR