Gene Franean1_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1027 
Symbol 
ID5669441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1207055 
End bp1207894 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content73% 
IMG OID641239956 
Producthypothetical protein 
Protein accessionYP_001505389 
Protein GI158312881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCCT CGAGCTGGTC GGCAAAGGCC CACAACGAGG ACGCTTGCGG CTTTCGATCG 
GACGGCGCCT GGGTGGTCGA CGGAGCGACA GCCCTCGAAG CCGGACCGCC GATCGAGGGC
CTTCCCGCCG CCGCCTGGCT GAGCTCGGTG ACCGACGCCT ACCTGCGCAG CGTCGACTGG
GACGGCACCG AGCTCGCGGA CGTCCTAGCG CGGCTGGTTG GGCACGTGAC GGCCCGGGCA
CGGCTCGCCG GGCTGCCGCA CGCGGGCACG TGCCGCTCCA GCGGGTTCCC CACCGCCGCG
ATCTCTGTGG TGCGTCAACG CGATGACCTG CTGGACCTGT GCCTTCTCGG TGACGTTCCC
GTCGTGCTGG CCCCGGGCGG CGGCCGACCG GCCCCGGTCG TGTTCGTGGA TCCGCAGTTC
GCCACGACCG AACGGAAGCT CCTCGAGACC ATCCGAGCGG ACATCGCCCG CGGCGACGAT
CCGGCGACAG CCTACGGACG GGCACGCGGG ACCCTACTGG AGCGCCGGCG GCGGCGGAAC
ACGTCGCGCG GGTCATGGAT CCTCGGGGAC GTCCCGGAGG CCACCCGTCA CGCGCACTGC
CGCACCCTCC GCCTGACCGG CGGCGCGGAT CTGCTGCTGG TCTCGGACGG CTTCGCCCGG
ATCATCGAGC CGTTCGCCCT GGTGGACGGG TACGGGGCTC TCGTTGACGC GGTGCGCGGC
GGAGCGGCGG AGGATCTGCT GCGCCGGCTC CGGGAAGCCG AGCGGGCGGA CCCCGAGTGC
CGCCGCCATC CGAGGTTCGG GGTCAGTGAC GACGCGAGCG TCGTGCATGC CGTGATCTGA
 
Protein sequence
MVASSWSAKA HNEDACGFRS DGAWVVDGAT ALEAGPPIEG LPAAAWLSSV TDAYLRSVDW 
DGTELADVLA RLVGHVTARA RLAGLPHAGT CRSSGFPTAA ISVVRQRDDL LDLCLLGDVP
VVLAPGGGRP APVVFVDPQF ATTERKLLET IRADIARGDD PATAYGRARG TLLERRRRRN
TSRGSWILGD VPEATRHAHC RTLRLTGGAD LLLVSDGFAR IIEPFALVDG YGALVDAVRG
GAAEDLLRRL REAERADPEC RRHPRFGVSD DASVVHAVI