Gene Franean1_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1010 
SymbolprfA 
ID5669424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1192412 
End bp1193482 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content73% 
IMG OID641239939 
Productpeptide chain release factor 1 
Protein accessionYP_001505372 
Protein GI158312864 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.527553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC CGCTCGCGGG CATGATCGCC GAGCACGCCG ACATCGAGAA GCGGCTCGCG 
GATCCGGACA TCCACAACGA TCCGGCGCGG GCCCGGGAGC TGACGCGCCG GTACGCCGAG
CTCGCCACCC CCGTCGACCT CGCACAGCGG CTGGAGCGCG TCGAGGGTGA CCTGGAGACC
GCCCGCGAGT TCGCCGAGCA GGACCCGTCG TTCCGCGACG AGGTCGTGGC CCTCGAGGCG
AGCCAGGCCG ATCTCGCCGC CCGCCTGCGG GCCTACCTGG TGCCCGTCGA CCCCGACGAC
AGCCGGGACG CCATCCTCGA GGTCAAGGCC GGCGCGGGCG GTGAGGAGTC CGCGCTGTTC
GCGGGCGACC TGCTGCGCAT GTACCTGCGC TACGCCGAGC GGCGCGGGTG GCGCACCCAG
ATCCTGGACG CGAACCCCAG CGACCTGGGC GGCTACCGGG ACGTCAGTGT GGCCGTCAAG
TCCCGCGGGA CGGCGGCCCC CGGCCAGGGG GTCTTCGGCC GGCTGCGGTT CGAGGGCGGT
GTGCACCGGG TGCAGCGGGT GCCGGTGACC GAGTCGGCGG GGCGGATCCA CACCTCCGCG
GCCGGGGTGC TGGTGCTGCC CGAGGCAGCC GACGTCGACA TCGAAGTCGA CCCGAACGAT
CTGCGGATCG ACGTGTTCCG CTCGTCCGGG CCGGGCGGCC AGAGCGTCAA CACCACCGAC
TCGGCGGTGC GCATCACGCA CCTGCCCACA GGGGTGGTCG TCTCCTGCCA GAACGAGAAG
AGCCAGCTCC AGAACAAGGA GTCGGCGATG CGCATCCTGC GGGCCCGGCT GCTCGCCGCG
GCGCGGGAGA AGGCCGAGAC GGCGGCGGCG GCGGCGCGGG CGAGCCAGGT GCGCACGGTC
GACCGCTCGG AGAAGGTCCG CACCTACAAC TTCCCCGAGA ACCGGATCAG CGACCACCGC
ATCGGCTACA AGGCGCACAA CCTGGAGGCC GTGCTGGACG GCGACCTCGA CGCCGTGATC
GAGGCCCTGA CCGAGGCGGA CCTGGAATCC CGGATGGCGG CCACGCCGTG A
 
Protein sequence
MTSPLAGMIA EHADIEKRLA DPDIHNDPAR ARELTRRYAE LATPVDLAQR LERVEGDLET 
AREFAEQDPS FRDEVVALEA SQADLAARLR AYLVPVDPDD SRDAILEVKA GAGGEESALF
AGDLLRMYLR YAERRGWRTQ ILDANPSDLG GYRDVSVAVK SRGTAAPGQG VFGRLRFEGG
VHRVQRVPVT ESAGRIHTSA AGVLVLPEAA DVDIEVDPND LRIDVFRSSG PGGQSVNTTD
SAVRITHLPT GVVVSCQNEK SQLQNKESAM RILRARLLAA AREKAETAAA AARASQVRTV
DRSEKVRTYN FPENRISDHR IGYKAHNLEA VLDGDLDAVI EALTEADLES RMAATP