| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0958 |
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| Symbol | |
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| ID | 5669372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 1121846 |
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| End bp | 1123225 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641239886 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001505320 |
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| Protein GI | 158312812 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0792374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0544047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCGCG GGCAGGACGA CCCGTGGTCG GCTCCGGTCG CGACCGGTCC GGTCCGGGCG
ACCGTCACCG TGCCGGGCTC GAAGTCCGGC ACGAACCGGG CGCTCGTGCT GGCCGCGGCG
GCTGACGGGG TCTCCCGCCT GCGCGGGGCG CTGCGCTCCC GGGACACCGT CCTGATGGCC
GCCGCCCTGC GCGAGCTCGG CGCGACGGTG ACCGACGAGG CCGCGCCAGG CGGCGCTGAG
CCGGGCAGGC CGGGTGAGCC GGGCGCGGAC CAGGGCGCCG CCGACATCGT CGTCACCGGC
CCGGTCGGCG CCGTACGGGG CACGGCCGCG ATCGACTGCG GCAACGCGGG AACGGTCGCG
CGCTTCACTC CCGCGCTGGC GACACTGGCC CGCGGGGACG TGCGCTTCGA CGGCGATCCC
CGGATGCGGG ACCGCCCGCT CACCCCGCTG CTGCGCGCGC TGCGCGAGCT GGGCGCCCAC
ATCGACGGCG ACCGGATGCC CTTCACCGTG CGCGGCACCG GGGCGGTCTC CGGCGGGGCG
GTGACGGTCG ACGCGTCGGA TTCCAGCCAG CTCGTCTCCG GCCTGCTGCT CGCCGCGGCG
CGGTTCGAGC GCGGTGCGAC CGTGACCCAC GCCGGTCACC GCCTGCCGTC CGGGCCGTAC
CTCGACATGA CCGTCGCCGA CCTGCGGGCG GCCGGGGTGG TCGTCGACGT CGACGACCCG
ACCGCGGACC TGCTGCGCGC CGGGGGCACT CCGGCCGCGT CGACCCGGCG CTGGCGGGTC
AAGCCCGGCG GGCCGCGGCC GCTGGACCGC GTGATCGAGC CCGACCTCAA CAGCGCCGCC
CCCTTCGTCG CCGCCGCGGC GGTGACCGGC GGCGAGGTGA CGATCACCGG CTGGCCGGCG
TCCACCGAGC AGCCCGGCCG GATGCTGCCG GACCTGCTGG TGGCCATGGG CTGCCGGGCG
GAGCTGGTGC CGGAGGGCCT GCGCGTCACC GGCGGCGGGC GGATCACCGG TATCGACGTC
GATCTCTCCG ACTTCGGCGA GGCGGCGCCG GTGCTGACCG GGCTGGCCGT GCTGGCGGAC
TCGCCGTCCC GGCTGCGGGG CATCGCCCAC CTGCGCCTGC AGGAGACCGA CCGGCTCGCC
GCGCTGGCGA GCGAGCTCGG CCGGCTCGGC GCCCGTGTCA CCGTCACCGA CGACGGCCTG
TCGATCATCC CGGTGCCGCT GCGCGGCGCC CGGCTCGACC CGCACGCGGA CCACCGGCTG
GCGATGACCT ACGCCGTGGT CGGCCTGGCG GTGCCCGGGG TCACCGTCGA CGACATCGCC
ACGACCGGCA AGACGGTCCC CGACTTCGCG CGGATGTGGA CGACGATGCT GGCCGGCTGA
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| Protein sequence | MQRGQDDPWS APVATGPVRA TVTVPGSKSG TNRALVLAAA ADGVSRLRGA LRSRDTVLMA
AALRELGATV TDEAAPGGAE PGRPGEPGAD QGAADIVVTG PVGAVRGTAA IDCGNAGTVA
RFTPALATLA RGDVRFDGDP RMRDRPLTPL LRALRELGAH IDGDRMPFTV RGTGAVSGGA
VTVDASDSSQ LVSGLLLAAA RFERGATVTH AGHRLPSGPY LDMTVADLRA AGVVVDVDDP
TADLLRAGGT PAASTRRWRV KPGGPRPLDR VIEPDLNSAA PFVAAAAVTG GEVTITGWPA
STEQPGRMLP DLLVAMGCRA ELVPEGLRVT GGGRITGIDV DLSDFGEAAP VLTGLAVLAD
SPSRLRGIAH LRLQETDRLA ALASELGRLG ARVTVTDDGL SIIPVPLRGA RLDPHADHRL
AMTYAVVGLA VPGVTVDDIA TTGKTVPDFA RMWTTMLAG
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