Gene Franean1_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0883 
Symbol 
ID5669297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1028524 
End bp1029186 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content73% 
IMG OID641239810 
ProductO-methyltransferase family protein 
Protein accessionYP_001505245 
Protein GI158312737 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.602304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.319704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACA TCGACATCGC CGCACGGGAA TCTGCCGTCG CCTACGCCGA GGGCTTCCTC 
GTGGAAGACC CTGTTCTTCG TGCTGCCCGC GCCCGCGCCG AGGAGGTCGG GATCGCCCCG
GTCAGCCCCG GCGCCGGGGC GGTGCTCCGC TTCCTCGCCG CATCCGTCGG CGCCCGCGCA
GTCGTCGAGA TCGGCACGGG TACCGGTGTG TCCGGAACGT GGCTCCTCCG CGGGATGCGT
CCTGACGGAA CCCTGACCAC GATCGACGTC GAGGCCGAGC ACCTGCGGCT CGCCCGCCGC
ATCTACGCCG ACGCAGGGAT GGCCCCCGGC CGCTCCCGGC TGATCACCGG GCGGGCCCTC
GAGGTGCTTC CCCGGCTCAC CGACGGCGCC TACGACCTGG TGTTCTGCGA CGCCGACCGG
CGGGAGAGCA CCGAGTACCT GACCCAGGCG CTCCGCCTGC TCCGTCCCGG CGGGATCGTG
GCGTTCACCG GAATCCTCGC GGGCGGGCAG ACCGGCGACC CGGCCACCCG CGTCCAGGAT
TCCGTGGCCG TCCGGGAGCT GGCGACCGCC GTCCGGGACG ACGTTCGCCT CACCCAGATG
CTGCTCACGA CCGGGGACGG TCTGCTGGTG GCGGTCGTGG CGAAGTCCTC CCCCGTCGGC
TGA
 
Protein sequence
MPDIDIAARE SAVAYAEGFL VEDPVLRAAR ARAEEVGIAP VSPGAGAVLR FLAASVGARA 
VVEIGTGTGV SGTWLLRGMR PDGTLTTIDV EAEHLRLARR IYADAGMAPG RSRLITGRAL
EVLPRLTDGA YDLVFCDADR RESTEYLTQA LRLLRPGGIV AFTGILAGGQ TGDPATRVQD
SVAVRELATA VRDDVRLTQM LLTTGDGLLV AVVAKSSPVG