Gene Franean1_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0823 
Symbol 
ID5669239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp962328 
End bp963839 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content73% 
IMG OID641239752 
Productputative magnesium chelatase 
Protein accessionYP_001505187 
Protein GI158312679 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.421013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGATC CGCCGGCTCC GCACAGTCCG TCCACGCCTC CGACGAACCC GATCACCGTC 
GGCGCGACGG CCCGGAAGAC GACCGACGCC CCCGGGTCCG GAACTCCGCC GACCGACATC
ACCCTGGCTG ACCTGCGCAG ATCAGGGCAC CGGCAGCGCT CGGTGCGCGC CGAGCTGCGC
GGCAACCTCC TCGCCAGGAT GCGGGCCGAC GAGACCCGTT TCCCGGGCAT CGTCGGTTTC
GACGACACCG TCCTGCCGCA GGTCGAACGA GCGCTGCTGG CCGGGCACGA CATCGTCTTC
CTCGGCGAGC GCGGGCAGGG CAAGACCCGT CTGATCCGCA CGCTCGTCGG CCTGCTCGAC
GAGTGGTCGC CGGCCATCGC CGGCTGCGAG ATCAACGACC ACCCCTACGC GCCGGTGTGC
GGCCGGTGCC GCCTGCTGCT CGCCGAGGTG GGCGAGCGGC TGCCCATCGC CTGGCGGCAC
CGCTCGGAGC GCTTCGGCGA GAAGCTCGCG ACCCCCGACA CCAGCGTCGG CGACCTGATC
GGCGACGTCG ACCCGGTGAA GGTCGCCGAG GGCCGCACCC TCGGCGACCC GGAGACCGTC
CACTACGGGC TGGTCCCGCG GACCAACCGC GGCATCTTCA GCATCAACGA GCTGCCCGAC
CTGGCCGAGC GCATCCAGGT CTCGCTGCTC AACGTGCTTG AGGAGCGAGA CATCCAGGTC
CGCGGCTACA TGCTGCGGCT GCCGCTGGAC ATCCTGCTGG TCGCCTCGGC GAACCCGGAG
GACTACACCA ACCGTGGCCG GATCATCACG CCGCTGAAGG ACCGCTTCGG CGCCGAGGTC
CGCACGCACT ACCCGCTGCG CCTGGACGAC GAGCTGCGGC TCATCCGGCA GGAGGCCGTG
GTCTCCTGGG CCGACTCGCC GCTGGGCCGG CCCGAGCTGC CCGACCACCT CATCGAGGTG
GTCGCCCGGT TTACCCGGGC AGTGCGCGAC GCGCCGCAGG TGGACCAACG CTCGGGTGTG
TCGGCCCGGC TCGCGGTGGC GGCGGCGGAG ACGGTGGCCG CCTCGGCCGT CCGCCGGGCG
GCGCTGACCG GCGAGGACAC CGCCACCGCG CGGGTCGTCG ACCTGGCCGC GATCGTCCCG
GCGGTACGGG GCAAGGTCGA GTTCGACCAG CTCGAGGAGG GCCGCGAGGA CGAGGTCCTG
GCCCTGCTGC TGCGCCGCGC GATCGCGGAG ACCTTCCGAG CGAAGCTGGC CGGCACCGAC
CTCTCCGGCC TGCAGCAGCG CTTCGAGCGC GACGGCGCGG TCGAGACGGG CGATCTCGTC
CCGGCGGCCG AGCTGCTGCG CCGGGTCGGT CCCGTCCCAG GCCTGGCGGC GATCCTCAAC
CGCCTCGACA TCGACGGCGC GGAGTCGCCG GGGCTGGCCG CGGCCGCCCT GGAGCTGGCG
ATGGAGGGCC TGCACCTCAA CCGCCGGCTC GCCAAGGAGG AACTGCCCGG CCGGACGGTC
TACGGGGGCT GA
 
Protein sequence
MADPPAPHSP STPPTNPITV GATARKTTDA PGSGTPPTDI TLADLRRSGH RQRSVRAELR 
GNLLARMRAD ETRFPGIVGF DDTVLPQVER ALLAGHDIVF LGERGQGKTR LIRTLVGLLD
EWSPAIAGCE INDHPYAPVC GRCRLLLAEV GERLPIAWRH RSERFGEKLA TPDTSVGDLI
GDVDPVKVAE GRTLGDPETV HYGLVPRTNR GIFSINELPD LAERIQVSLL NVLEERDIQV
RGYMLRLPLD ILLVASANPE DYTNRGRIIT PLKDRFGAEV RTHYPLRLDD ELRLIRQEAV
VSWADSPLGR PELPDHLIEV VARFTRAVRD APQVDQRSGV SARLAVAAAE TVAASAVRRA
ALTGEDTATA RVVDLAAIVP AVRGKVEFDQ LEEGREDEVL ALLLRRAIAE TFRAKLAGTD
LSGLQQRFER DGAVETGDLV PAAELLRRVG PVPGLAAILN RLDIDGAESP GLAAAALELA
MEGLHLNRRL AKEELPGRTV YGG