Gene Franean1_0757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0757 
Symbol 
ID5669173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp884384 
End bp885307 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content72% 
IMG OID641239684 
Productglycosyl transferase family protein 
Protein accessionYP_001505121 
Protein GI158312613 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.464823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00627267 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGGCAC CGCTCTCCGC GGGCTCCGCC CCGGCGCCGC ACGGCGCCGG CGATGTCCCA 
GCCAGCGTCG TCCTGGCCAG CGTCGTCGTG CCGGCGCACA ACGAGGAGTC CGTCATCGGA
CGGTGCCTCG CGGCGCTCAG CGTCGGGCTG CCCGCCGGAG CACTCGACGT GATCGTGGTG
TGCAACGGAT GCACGGACGG CACCGCCGCG GCCGCCCGTG CCCGTGGCGT CCGGGTGATC
GAGACGGATC GGGCGAACAA GGCGGCCGCC CTGAACACCG GGGACGCGGC GGCCATGGCC
TTCCCGCGCT TCTACGTCGA CGCCGATGTG GAGGTCGCCG GAGCGGCGCT GCTCGAGGTC
GCCGACGTCC TGCGCACGGG TGCGGCACTC GCCGCGGCGC CCGCGCTGCG TCCGTGCATG
ACCGGGGTGG CCCGGCCCGT CCGCGACTAC TACCGGATCT GGATGCGCCT GCCCTACGTC
GCCGACGGGC ACGTGGGCTC CGGAGTCGTC GGTGTCAGCG ATGCCGGGCG GAAGCGTTTC
ACCCGCTTTC CCGAGGCCAT CGCCGACGAT CTTTACCTCT ACCACCAGTT CAGCGCGGAG
GAACGGACCA CGGTGGACTC CGTCCACTTC ACCGTCTATC CCGCGAGGAC GGTGCGGGAT
TTCGTCCGGA GGAAGATCCG GGTGTACGCC GGGAACATCG AACTCCGCGG CCGTGGGCTG
GTGCCCGCGG AGAACCGGAA CACCGGCAGC GCGTCCTGGC TGTCCGTCGT CGCCGCCGAT
CGCCGGCTGC TCACCGCCGC CCCCGCCTAC CTCGCCATCT CGGCGGTGGC GAAGCTGCTG
GCCATCCGGA AGGTCCGCCA CGGCGACCTC GGTGCCTGGG AGCGTGACGA CAGCAGCAGG
CGCCTTCTTG AGGAGACGAC GTGA
 
Protein sequence
MTAPLSAGSA PAPHGAGDVP ASVVLASVVV PAHNEESVIG RCLAALSVGL PAGALDVIVV 
CNGCTDGTAA AARARGVRVI ETDRANKAAA LNTGDAAAMA FPRFYVDADV EVAGAALLEV
ADVLRTGAAL AAAPALRPCM TGVARPVRDY YRIWMRLPYV ADGHVGSGVV GVSDAGRKRF
TRFPEAIADD LYLYHQFSAE ERTTVDSVHF TVYPARTVRD FVRRKIRVYA GNIELRGRGL
VPAENRNTGS ASWLSVVAAD RRLLTAAPAY LAISAVAKLL AIRKVRHGDL GAWERDDSSR
RLLEETT