Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0757 |
Symbol | |
ID | 5669173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 884384 |
End bp | 885307 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641239684 |
Product | glycosyl transferase family protein |
Protein accession | YP_001505121 |
Protein GI | 158312613 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.464823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00627267 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGGCAC CGCTCTCCGC GGGCTCCGCC CCGGCGCCGC ACGGCGCCGG CGATGTCCCA GCCAGCGTCG TCCTGGCCAG CGTCGTCGTG CCGGCGCACA ACGAGGAGTC CGTCATCGGA CGGTGCCTCG CGGCGCTCAG CGTCGGGCTG CCCGCCGGAG CACTCGACGT GATCGTGGTG TGCAACGGAT GCACGGACGG CACCGCCGCG GCCGCCCGTG CCCGTGGCGT CCGGGTGATC GAGACGGATC GGGCGAACAA GGCGGCCGCC CTGAACACCG GGGACGCGGC GGCCATGGCC TTCCCGCGCT TCTACGTCGA CGCCGATGTG GAGGTCGCCG GAGCGGCGCT GCTCGAGGTC GCCGACGTCC TGCGCACGGG TGCGGCACTC GCCGCGGCGC CCGCGCTGCG TCCGTGCATG ACCGGGGTGG CCCGGCCCGT CCGCGACTAC TACCGGATCT GGATGCGCCT GCCCTACGTC GCCGACGGGC ACGTGGGCTC CGGAGTCGTC GGTGTCAGCG ATGCCGGGCG GAAGCGTTTC ACCCGCTTTC CCGAGGCCAT CGCCGACGAT CTTTACCTCT ACCACCAGTT CAGCGCGGAG GAACGGACCA CGGTGGACTC CGTCCACTTC ACCGTCTATC CCGCGAGGAC GGTGCGGGAT TTCGTCCGGA GGAAGATCCG GGTGTACGCC GGGAACATCG AACTCCGCGG CCGTGGGCTG GTGCCCGCGG AGAACCGGAA CACCGGCAGC GCGTCCTGGC TGTCCGTCGT CGCCGCCGAT CGCCGGCTGC TCACCGCCGC CCCCGCCTAC CTCGCCATCT CGGCGGTGGC GAAGCTGCTG GCCATCCGGA AGGTCCGCCA CGGCGACCTC GGTGCCTGGG AGCGTGACGA CAGCAGCAGG CGCCTTCTTG AGGAGACGAC GTGA
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Protein sequence | MTAPLSAGSA PAPHGAGDVP ASVVLASVVV PAHNEESVIG RCLAALSVGL PAGALDVIVV CNGCTDGTAA AARARGVRVI ETDRANKAAA LNTGDAAAMA FPRFYVDADV EVAGAALLEV ADVLRTGAAL AAAPALRPCM TGVARPVRDY YRIWMRLPYV ADGHVGSGVV GVSDAGRKRF TRFPEAIADD LYLYHQFSAE ERTTVDSVHF TVYPARTVRD FVRRKIRVYA GNIELRGRGL VPAENRNTGS ASWLSVVAAD RRLLTAAPAY LAISAVAKLL AIRKVRHGDL GAWERDDSSR RLLEETT
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