Gene Franean1_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_0734 
Symbol 
ID5669150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp854692 
End bp855417 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content69% 
IMG OID641239661 
ProductYceI family protein 
Protein accessionYP_001505098 
Protein GI158312590 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00686408 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAGACA GCACGCCTCG TAAAAAGCGG CGCTGGCCGC TGATCCTGGT CGGCGCCGTC 
GTGGCCGTGG CGGTCCTGGT CGTGGGCGGC ACCGCGTTCT ACATCAACGT GATCAAGGAG
GACGCCCCAG AGGAGTTCGC ACTCGACGAC CCCGGGCCCA GCACCTCGTC CGCCGGTTCC
ACGGCCGGCG ATTCGGTCGA CGGCGCGTGG CGGATCACCG ACGGGTCCGA GGCCGGCTAC
CGGGTCGAGG AGGTCCTCTT CGGCCAGAAG ACGACCGCCG CGGGCCGCAC CTCGGAGGTG
TCCGGGTCGA TGACCATCGC CGACGACGGC GTCACCGAGG CGCAGTTCGA GGTGCAGATG
GCGTCGGTGC GCAGCGACGA GGATCGTCGC GACAACCAGT TCCGCGGCCG GATCATGGAT
GTCGACACCT ATCCGACGTC CCAGTTCACG CTCACCGAGC CGATCGACCT GGGTTCGGTG
CCGGCCGCCG ACGAGACGCG CACCTACCCG GCCACCGGAA CGCTGACCAT GCACGGCACC
GCCCGCGAGG TGACCATGAG CCTGCAGGCC CGCCGCACTG GCGACCAGAT CCAGATCGTC
GGCCAGATCC CGGTGACCTT CGCCGACTAC GGCATCCCGA ACCCGAGCAT CCCGGGCATC
TCCACCGAGG ACCACGGGAT CATGGAGGTC TCGCTGAAGT TCGTGCGCGG CGAGCCGACC
GAGTAG
 
Protein sequence
MADSTPRKKR RWPLILVGAV VAVAVLVVGG TAFYINVIKE DAPEEFALDD PGPSTSSAGS 
TAGDSVDGAW RITDGSEAGY RVEEVLFGQK TTAAGRTSEV SGSMTIADDG VTEAQFEVQM
ASVRSDEDRR DNQFRGRIMD VDTYPTSQFT LTEPIDLGSV PAADETRTYP ATGTLTMHGT
AREVTMSLQA RRTGDQIQIV GQIPVTFADY GIPNPSIPGI STEDHGIMEV SLKFVRGEPT
E