| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0609 |
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| Symbol | |
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| ID | 5669026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 707259 |
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| End bp | 708572 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641239536 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001504974 |
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| Protein GI | 158312466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.357283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGT TCTCCTATCG CGACGGCACG TTGTGGTGTG AGCAGACAGA GCTACGCGAG
GTGGCCGAAA AATTCGGTAC GCCGACCTAT GTCTACTCTG CGGCGACCCT CGTCGATCAC
TATGTGCGGT TCGCGAAGGC GTTCGAGTCG ATCAACCCGC TCATCTGTTT CTCCGCGAAA
GCGCTGAGCA ATGTTCACCT GCTCCGGCTG CTCGCCGGGC AGGGCGCCGG CATCGACACG
GTGAGTGGCG GCGAGCTGCA CCGCGCGCTG GTCGCCGGGG TCGACCCGGA GCGGATCGTG
CTGGCCGGGG TGGGCAAGTC CGTCGACGAG CTGCGCGCCG CGGTCCGCCA CGACATCCGC
TGCATCAACG TCGAGTCCGA GGCCGAGGTC GAGCTGCTGG CGCGCGTCGC GCGCGAGGAG
GACCGCCGGC CGCGCCTGGC GATCCGGGTG AACCCCGACA TCGCGCCGGA CATGCGCACC
CCCGCCCGGA CCACCACCGC CATCCGCGGC GCCAAGTTCG GGGTCGACAT CGAACGGGCC
GCGGCGCTGT TCCGGGCCGC CTCCACCGAC GAGTTCCTGC GCGCCGAGGG CTTCCACGTG
CACATCGGCA GCCCCATCTT CGACCCGCGG GTCTACGCGA CGGCGCTCGA CCGCATCCTG
GCACTCACCG CCGGGCTCGA GGCCGATGGG CACAGCGTCA CCACCCTCAA CGTGGGCGGC
GGCTTCCCCG CCGAGTACAC CGAGGGCAGC GCCCCGGGCT GGGACGACTT CGCGGAGGCG
ATCTGCCCCC GGCTGCAGGG CTTTGTCGAC CGCGGCGGGC AGGTCGTCTT CGAACCGGGC
CGGACGATCG CGGCCAACGC CGGCATCCTG CTCGCCACCG TCCGTTACCG CAAGCGCGCG
GGCGACCGCG AGCTCGTCGT GATCGACGCC GGGATGACAC ATATAGTCCG CGCTGCGATG
TACGACAGCT ACCACTTCAT GTGGCCGGTG ACTCCGGTGA ACGGCACCGT TCCCCGCTCA
CGGGACCAGC AGTCGATCGA TGACCTCGTC GACTACGACG TGGTCGGCCC GATCTGCGAG
TCGAGCGACT ATCTGGCAAA AGGCCGGGCC CTGCCGGCGA TGGTTTCCGG GGATCTCATC
GCGATCTTCA GTGCGGGTGC CTACGGAATG ACTATGACGA GTAACTACAA CAGCCAGCTC
CGGCCGGCCG AGGTTCTCGT CCGCGGCGGC CGGGCGGATC TCATCCGCCG CCGCGAGACC
TACGACGACC TCGTCGCCCT CGAGCTCCTC GACGGCCTGA CCCCACCACT CTGA
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| Protein sequence | MDEFSYRDGT LWCEQTELRE VAEKFGTPTY VYSAATLVDH YVRFAKAFES INPLICFSAK
ALSNVHLLRL LAGQGAGIDT VSGGELHRAL VAGVDPERIV LAGVGKSVDE LRAAVRHDIR
CINVESEAEV ELLARVAREE DRRPRLAIRV NPDIAPDMRT PARTTTAIRG AKFGVDIERA
AALFRAASTD EFLRAEGFHV HIGSPIFDPR VYATALDRIL ALTAGLEADG HSVTTLNVGG
GFPAEYTEGS APGWDDFAEA ICPRLQGFVD RGGQVVFEPG RTIAANAGIL LATVRYRKRA
GDRELVVIDA GMTHIVRAAM YDSYHFMWPV TPVNGTVPRS RDQQSIDDLV DYDVVGPICE
SSDYLAKGRA LPAMVSGDLI AIFSAGAYGM TMTSNYNSQL RPAEVLVRGG RADLIRRRET
YDDLVALELL DGLTPPL
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